PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00050.1.g03330.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 342aa    MW: 37824.2 Da    PI: 4.8225
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00050.1.g03330.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-12133184156
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   s+++GVr ++ +g ++AeIrdp    +r kr ++g+f  +eeAa+a++a +++++ e
  Zjn_sc00050.1.g03330.1.am.mk 133 SRFPGVRLRP-WGTYAAEIRDP----IRkKRKWIGSFLVEEEAAAAYEAQAREYRAE 184
                                   789*******.**********7....246************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.03E-12133184IPR016177DNA-binding domain
PfamPF008478.1E-6133183IPR001471AP2/ERF domain
SMARTSM003802.7E-9134199IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-16134183IPR001471AP2/ERF domain
PROSITE profilePS5103216.147134193IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MSPALLLLHG SDFPSPSSCT LLQFRQNGAR ACVFRLRIAR PSAVVNLDCR VAFPCSKRAV  60
VAMPAKVFVP LDSSDDDDDQ NIKKEKKVTR EVLIPVMDSK AALVPAKKSK ATKRKTTLLP  120
CDLKGPKKKE PSSRFPGVRL RPWGTYAAEI RDPIRKKRKW IGSFLVEEEA AAAYEAQARE  180
YRAELLAMKA QLPVSQPPAL SSSPSVSCDL PSVSGEKICQ EAENRIFTEV VDSEPVDDLV  240
LHISDKPRDQ DLSMDVLSGL IEELPISDCI SRADELRHGG DFTSSEDTIL ISDFVDVTQM  300
PLDDDYIALA DISHLPLPIK DPEFDLGAEL DWSWLDLAPN EN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956545.11e-64ethylene-responsive transcription factor ERF021
RefseqXP_004956547.11e-64ethylene-responsive transcription factor ERF021
RefseqXP_022679717.11e-64ethylene-responsive transcription factor ERF021
TrEMBLA0A0A9DCI83e-73A0A0A9DCI8_ARUDO; Uncharacterized protein
STRINGSi030741m4e-64(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.15e-12ERF domain protein 10