PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00050.1.g03120.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 363aa    MW: 38480.5 Da    PI: 10.428
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00050.1.g03120.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414.3e-13230279352
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                                   e +r rrk++NRe+ArrsR+RK++ ++ L   v +L+ +Nk+L   l   
  Zjn_sc00050.1.g03120.1.am.mk 230 ENRRKRRKESNRESARRSRLRKQQHLDDLNSQVNQLKDQNKQLGAALRLT 279
                                   5689***************************************8666544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.8E-10225280No hitNo description
SMARTSM003383.1E-13228292IPR004827Basic-leucine zipper domain
PfamPF001702.7E-10230274IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.105230293IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.88E-10232282No hitNo description
CDDcd147029.16E-20233281No hitNo description
PROSITE patternPS000360235250IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MSRHLDSSTE STKPNPRQRS RRAALSGCPK QAPEPRQWKG TTMCTEKGRG SGGADLVGVE  60
EADAGRGGGE QTLGASSGPQ PVPGKPHGRT LVPAGVCGLS CTSGLLWTAC CLRLISSEFD  120
SVGQLCNSLS PSSRAPPLAS GRTRGGSAKI FCADRKPSKR GRLCRNFLSD IQMLLLSGPP  180
SSMLGSAITR LVQSFSVVFL YCGTSSGSSL GTRGSRSSSE NAVNLQAQME NRRKRRKESN  240
RESARRSRLR KQQHLDDLNS QVNQLKDQNK QLGAALRLTS QNLVAVQAQN SVLQTQKMEL  300
ESRLGSLTEI LLYLNAGAST STGPAMNAGI LNNGGLAPTG GACDVLGAGA WNQPVADLYY  360
QCF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232237RKRRKE
2244250RRSRLRK
3244251RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-17basic leucine-zipper 44