PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00050.1.g03060.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 264aa    MW: 28798.5 Da    PI: 5.051
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00050.1.g03060.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.31.5e-124570126
                         G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                                    ++rlrWt+eLHerFveav+qLGG++ 
  Zjn_sc00050.1.g03060.1.sm.mkhc 45 RQRLRWTNELHERFVEAVTQLGGPDS 70
                                    58*********************984 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.3E-114472IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-84670IPR006447Myb domain, plants
PfamPF143794.1E-2392137IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MHSTKPEASF EQAHTAPDVN QQQMVFAGNM GASNGANNNT NMAARQRLRW TNELHERFVE  60
AVTQLGGPDS NKADNKDPGD LLAGLEGSAG LQISEALKLQ MEVQKRLHEQ LEVQRQLQLR  120
IEAQGKYLQK IIEEQQRLTA VKPEVPGASI AVSSNEQVPD SERTEPSTPA PTSESPTQGA  180
SNRDNGGQTE APKSPCHDDS LCQHEPLTPD SNCKPGSPTA SPNHERVAKR QRGSGTEFSE  240
GDFPLTRHIF ESSSGSEFQQ YSMS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001152613.11e-136MYB-CC type transfactor
RefseqXP_023156307.11e-136MYB-CC type transfactor isoform X1
SwissprotQ9SJW09e-64PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A3L6DZW51e-135A0A3L6DZW5_MAIZE; Myb family transcription factor PHL7
TrEMBLB4F7W71e-135B4F7W7_MAIZE; MYB-CC type transfactor
TrEMBLK4JRK41e-135K4JRK4_MAIZE; G2-like transcription factor (Fragment)
STRINGGRMZM2G173943_P021e-135(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-38G2-like family protein