PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00050.1.g00470.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 651aa    MW: 69284.6 Da    PI: 11.3297
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00050.1.g00470.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_155.11.6e-17582634355
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                                   +++r +r++kNRe+A rsR+RK+a++ eLe++vk L++eN++L+ + e+l+  
  Zjn_sc00050.1.g00470.1.am.mk 582 SDRRKKRMIKNRESAARSRARKQAYVRELEREVKLLQQENQSLRVKYEQLRVS 634
                                   689******************************************99999865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.3E-13580645IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.013582632IPR004827Basic-leucine zipper domain
PfamPF001708.8E-16583634IPR004827Basic-leucine zipper domain
CDDcd147072.02E-18584631No hitNo description
SuperFamilySSF579591.0E-11584633No hitNo description
Gene3DG3DSA:1.20.5.1707.2E-15584635No hitNo description
PROSITE patternPS000360587602IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MRSFSIWEKT CTDAIDLPST NPIDQEVLVA PVAAGQESCR SHAKPTGETK TAASSAPVRA  60
GACCRGKRAQ KASESSPAPT HERAVRTVPR LAEAASLAAS HPPSPRARPR HCGRSLLLNR  120
GDAASAAART YRPLRSARHH GAALISAAPC GHARALQASV APVPVRHVTL PRARAVKREG  180
NVVRERPRRL ATSFAVPVEH LLCVLGGTRT PKSREATKLC GATAGSGPAA SYRALSQTWT  240
ALIVLDPGAT RIPRKKRGAD TANPSREIRP APCEKRRRGR RQSPAALATE PSATALPASS  300
EIDDLLANLF SEPLDRRGNS SARVGQAQIP TEKCLFVSLA CLLCPLPGDR SNGTAQQDEK  360
TRRRRNLSDP GPWVIWRTGA NLTSAESRSP VNSEASLSRA HTRSGTVRAE KDLWLGRPRA  420
TKPAGPLPLW PCGAPLRPKT SKKKGKPDRP RADAMAAMDM DDDEDIWANT SSPSASPPQP  480
AGAGFISTQL SLNSQLHLLS SAAAHGGSPP DRSGGDGVFA ADGGIRHHVV GFGGGAFRNA  540
SAAPAPSFFP YGLDAGAGRG ALEHEMCLGP AGAAWGGAVG GSDRRKKRMI KNRESAARSR  600
ARKQAYVREL EREVKLLQQE NQSLRVKYEQ LRVSVEVPVK KTLRRLPSAP F
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLC0201157e-55LC020115.1 Sasa veitchii var. hirsuta SvFDL1 mRNA for FD-like gene, complete cds, strain: SvFLD1c.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97643044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.25e-19basic region/leucine zipper motif 27