PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00049.1.g03470.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 270aa    MW: 28955.3 Da    PI: 8.9876
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00049.1.g03470.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57353.47.4e-1792180397
                          DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 
                                     +q+lw++ De++lL+G   fk++ g+ p   d+ ++y f+++ is +  +  +  K++rLK Kf++           + 
  Zjn_sc00049.1.g03470.1.sm.mkhc  92 AQKLWTDADEVALLRGAAAFKERSGVAPRLpDMGDLYAFIRDTISPDLDQARVYYKLKRLKSKFQRSAPG-------AS 163
                                     79************************98877*********************************999888.......77 PP

                          DUF573  81 skehdqkifelskkiWg 97 
                                     s+ hd+ + +ls+ +Wg
  Zjn_sc00049.1.g03470.1.sm.mkhc 164 STVHDRLVRDLSSDLWG 180
                                     88999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.8E-1593180IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MPSKRSSPNA MDEAAAAAAR LDAASPRAKS RVRDRRRSPN PNPSSRHRAP GLGPASASRK  60
SDRRSKPRSF ADSTTLAGAA AAAAASWSRG AAQKLWTDAD EVALLRGAAA FKERSGVAPR  120
LPDMGDLYAF IRDTISPDLD QARVYYKLKR LKSKFQRSAP GASSTVHDRL VRDLSSDLWG  180
SELAHRGEDG ERAEDDGADV EEAEGVNAIQ VHEPGRLPIV REVLGEYWRL NGQALSGVSL  240
EKGLSLVTPD EADVAEAKCG LVEYIAGLDT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008649213.12e-75STOREKEEPER protein
RefseqXP_008649214.12e-75STOREKEEPER protein
RefseqXP_020395036.12e-75STOREKEEPER protein
TrEMBLA0A0A9EWQ21e-77A0A0A9EWQ2_ARUDO; Uncharacterized protein
STRINGGRMZM2G008558_P028e-75(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66420.17e-09DNA-binding storekeeper protein-related transcriptional regulator