PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00045.1.g01150.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 780aa MW: 84497.8 Da PI: 10.339

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00045.1.g01150.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.4	1.3e-07	103	144	21	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 R+R+ka+++ Le kvk Le++N+++ ++l++l++e + l++ Zjn_sc00045.1.g01150.1.am.mk 103 RERRKAYLADLEVKVKDLEKKNSEMEEKLSTLQNENQMLRQI 144 9************************************99876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.3E-4	92	147	IPR004827	Basic-leucine zipper domain
CDD	cd14704	4.22E-10	96	139	No hit	No description
SuperFamily	SSF57959	6.88E-6	100	145	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.1E-8	102	147	No hit	No description
SuperFamily	SSF81383	5.49E-8	442	521	IPR001810	F-box domain
Gene3D	G3DSA:1.20.1280.50	6.8E-4	446	478	No hit	No description
Pfam	PF00646	3.2E-5	447	483	IPR001810	F-box domain
Gene3D	G3DSA:2.130.10.80	2.1E-34	479	710	IPR015916	Galactose oxidase, beta-propeller
SuperFamily	SSF117281	1.05E-37	506	730	No hit	No description
SMART	SM00612	0.003	548	595	IPR006652	Kelch repeat type 1
Pfam	PF01344	1.3E-11	584	630	IPR006652	Kelch repeat type 1
SMART	SM00612	1.7E-5	596	644	IPR006652	Kelch repeat type 1

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0005515	Molecular Function	protein binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence Send to blast
MDRMQEQAAS SLPSSSERSS SSAHHMEMDL KEGKRLRMES DEEIRRVPEL GLELPSGPST 60 SGREAGGAER AQASAAAAAQ ACGRRRLRTP ADKEHKRLKR FARERRKAYL ADLEVKVKDL 120 EKKNSEMEEK LSTLQNENQM LRQILKNTTV SRRGPAAIGR TCTLSIIDLD SCSTSDGARP 180 RIDLPTLGAV GGRSCRLTRP PPPVSFPFVL IPSDSKTVTS RGRNVFWRAA SLACVRSYGS 240 LAVSSCRLAL LPDAPSRGSP SDTFIAAEIL KQGPLPSCPA KKSCASLGRM CQCPLGPRPE 300 THEHGLNLIT RGGRGSLHLL VVSHQPPPSS FLLLAAAPGQ ARPAAAGRWE GEDSFWLGGL 360 RVGRAVSSCF VPWFTRHAVS WSMAVDSSSA SCLCRVEKSS VAGAAARRVP LPRACAQRSV 420 RASIHPLKPK ASPRQGDRSR GGQCPLLPGL PDDLAIACLI RVPRADHSAL RLVCRRWFRL 480 LAGNYFYGLR RRLGLAEQWL YAVKRDRDGL VSWDALDPAR GAWRALPPVP QEYGDADGFG 540 CAVLGGCHLY LLGGKDPRRG TMRRVVFFSA RSNRWHRAPD MLRRRHCFGS CVMGNRLYVA 600 GGESGGGGGG IRSAEVFDPA KNRWSILSDM AAAMVPFVSA VHGGRWYLKG FGPQQQVISQ 660 VYSLETDAWS VVLDGLVTGW KSPSACLDGR LYAADCKDGC RLRAYDEAAD ASHAVEATAI 720 VPLGSRLCVV RNDMSVSAVG LVAGTASQRW ETLAVKSHAK NIAGRGRAKN SILHCQVLEA

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence Send to blast

MDRMQEQAAS SLPSSSERSS SSAHHMEMDL KEGKRLRMES DEEIRRVPEL GLELPSGPST  60
SGREAGGAER AQASAAAAAQ ACGRRRLRTP ADKEHKRLKR FARERRKAYL ADLEVKVKDL  120
EKKNSEMEEK LSTLQNENQM LRQILKNTTV SRRGPAAIGR TCTLSIIDLD SCSTSDGARP  180
RIDLPTLGAV GGRSCRLTRP PPPVSFPFVL IPSDSKTVTS RGRNVFWRAA SLACVRSYGS  240
LAVSSCRLAL LPDAPSRGSP SDTFIAAEIL KQGPLPSCPA KKSCASLGRM CQCPLGPRPE  300
THEHGLNLIT RGGRGSLHLL VVSHQPPPSS FLLLAAAPGQ ARPAAAGRWE GEDSFWLGGL  360
RVGRAVSSCF VPWFTRHAVS WSMAVDSSSA SCLCRVEKSS VAGAAARRVP LPRACAQRSV  420
RASIHPLKPK ASPRQGDRSR GGQCPLLPGL PDDLAIACLI RVPRADHSAL RLVCRRWFRL  480
LAGNYFYGLR RRLGLAEQWL YAVKRDRDGL VSWDALDPAR GAWRALPPVP QEYGDADGFG  540
CAVLGGCHLY LLGGKDPRRG TMRRVVFFSA RSNRWHRAPD MLRRRHCFGS CVMGNRLYVA  600
GGESGGGGGG IRSAEVFDPA KNRWSILSDM AAAMVPFVSA VHGGRWYLKG FGPQQQVISQ  660
VYSLETDAWS VVLDGLVTGW KSPSACLDGR LYAADCKDGC RLRAYDEAAD ASHAVEATAI  720
VPLGSRLCVV RNDMSVSAVG LVAGTASQRW ETLAVKSHAK NIAGRGRAKN SILHCQVLEA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025799180.1	0.0	F-box/kelch-repeat protein At1g55270-like
Swissprot	Q93W93	1e-148	FBK22_ARATH; F-box/kelch-repeat protein At1g55270
TrEMBL	A0A3L6RQY0	0.0	A0A3L6RQY0_PANMI; F-box/kelch-repeat protein
STRING	Si017291m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1713	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11260.1	5e-29	bZIP family protein

Publications ? help Back to Top
Yu SI,Kim H,Yun DJ,Suh MC,Lee BH Post-translational and transcriptional regulation of phenylpropanoid biosynthesis pathway by Kelch repeat F-box protein SAGL1. Plant Mol. Biol., 2019. 99(1-2): p. 135-148 [PMID:30542810]