PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00044.1.g04780.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 318aa    MW: 33479.5 Da    PI: 8.3451
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00044.1.g04780.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY599.3e-19118175159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ldDg++WrKYGqK +++se+pr    Ct+    gC+++k+v+ s+++p+  ++ Y g+H+++
  Zjn_sc00044.1.g04780.1.sm.mk 118 LDDGHAWRKYGQKRIHDSENPR----CTHMpdqGCKARKQVQVSDSNPSEYVVSYFGQHTCR 175
                                   59*******************6....9998888**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-20109177IPR003657WRKY domain
SuperFamilySSF1182902.22E-19112177IPR003657WRKY domain
PROSITE profilePS5081117.213113177IPR003657WRKY domain
SMARTSM007743.6E-28118176IPR003657WRKY domain
PfamPF031062.8E-17119175IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MASPGSSGDR SPAVPRKVLD DLLGVHKRVA MLQTMVDGSP AAARELVDGM MTRVTNALTT  60
ALNTSGVVVD GVEWSSLGSR GWPGGRRDSA GAVVHRRSSS SRRRTLSPFL KTVTTTTLDD  120
GHAWRKYGQK RIHDSENPRC THMPDQGCKA RKQVQVSDSN PSEYVVSYFG QHTCRDPSTV  180
PIVIDAPMNL SNFISFGGST AATSAAHAVP PRRLQAVAPT TMRSRLAGYI SSSLPAAAEQ  240
RCRSEEAISL AGELGAVVAG ALSNAGRTTV GSAPEFDVLL DVGIDTASSF PSSPSSLGGF  300
MTGSFGSFGD DDFFGFDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-21112175269OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802431.13e-79uncharacterized protein LOC112881781
TrEMBLA0A3L6QUJ93e-78A0A3L6QUJ9_PANMI; Putative WRKY transcription factor 38
STRINGSi030395m2e-76(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125272837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-20WRKY DNA-binding protein 46