PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00035.1.g00600.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 478aa    MW: 52393.6 Da    PI: 10.0596
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00035.1.g00600.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353e-11192221534
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                                     k  rr+++NReAAr+sR+RKka+i++Le+ 
  Zjn_sc00035.1.g00600.1.sm.mkhc 192 KTLRRLAQNREAARKSRLRKKAYIQQLETS 221
                                     788************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-6188250IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-8189231No hitNo description
PROSITE profilePS502178.841190234IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.38E-7192227No hitNo description
PfamPF001705.1E-8192221IPR004827Basic-leucine zipper domain
PROSITE patternPS000360195210IPR004827Basic-leucine zipper domain
PfamPF141442.0E-24276349IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MEGFSVRRER PWRRMVWALL KGSMGGSGGG EEHHHRRQPS DLPVGFQSAA SQPPMIASST  60
MSKESVSSYD MAEFDQSAIF LYLDGHDQAS IQEQRQTLNI FPSQPMHAAE PIPAKVGNMG  120
MVTAMLANAN HSSPKRPEQG GQRSLVPSPP GPSVAAPKEN KSSGVTIAKK EVTSGRKGAA  180
GSSDQGRVRD PKTLRRLAQN REAARKSRLR KKAYIQQLET SRIRLSQLEQ QVQTARVQGV  240
FSGTGGQLGF PSASSPAAAM FDLEYGRWVE EHSKLMFQLR AALNEPQLLE DQLQGFVNAA  300
LAQHEELLNL KGAIARADVF HLLSGVWASP AERGFLWLGG FRPSEVIKVA LKHVEPLSEG  360
QILGIYNFQQ SVQEKEDALS RGIEAIQNTI SDIVAAPEIA PTNFMGHMSL AMNKAASMEG  420
LVRQADGLRQ QTLHKLHEIL TTHQAGRCLV AIADYFHRLR ALSTLWVARP RQDEGPGI
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012698769.10.0transcription factor TGAL7 isoform X1
SwissprotQ6H4340.0TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBLA0A3L6TBM40.0A0A3L6TBM4_PANMI; Transcription factor TGA2-like isoform X1
STRINGSi029966m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-126bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]