PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00031.1.g01700.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 342aa MW: 36496.4 Da PI: 8.0234

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00031.1.g01700.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.7	1.4e-09	183	241	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +++ eLe+k ++L++e ++L +l l+ + l++e+ Zjn_sc00031.1.g01700.1.sm.mkhc 183 KRAKRILANRQSAARSKERKIKYTSELERKLQTLQTEATTLSAQLTLLQRDTSGLTTEN 241 9**********************************************999888888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.7E-14	179	243	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.818	181	244	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.4E-8	183	241	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.6E-10	183	237	No hit	No description
SuperFamily	SSF57959	3.31E-10	183	234	No hit	No description
CDD	cd14703	3.74E-23	184	233	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MDPRFPPPAP ASSSFLGDGA PPPRGHHRRA HSETFIRLPD ADLLLDPDGD FFSDLDFPSL 60 SDDSAAASDP APPPPPQQQQ QQQQASSPAP PRPRGGGGGG GAHVRSLSFD AALFDGLSLQ 120 QGGGGGGGGG GSGRAAGHKR SGSVDGPGSP FEGESALSGV LPDYAKKAVP AEKVAEVALL 180 DPKRAKRILA NRQSAARSKE RKIKYTSELE RKLQTLQTEA TTLSAQLTLL QRDTSGLTTE 240 NRELKLRLQA MEEQAKLRDA LNDALREEVQ RLKIAAGQVP NMNGNPFNGG LPQQQQQMAS 300 YFSQPQQMQY FGGHQVQHHR PNHQPQNSSN GGRSLNDSMD FV

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MDPRFPPPAP ASSSFLGDGA PPPRGHHRRA HSETFIRLPD ADLLLDPDGD FFSDLDFPSL  60
SDDSAAASDP APPPPPQQQQ QQQQASSPAP PRPRGGGGGG GAHVRSLSFD AALFDGLSLQ  120
QGGGGGGGGG GSGRAAGHKR SGSVDGPGSP FEGESALSGV LPDYAKKAVP AEKVAEVALL  180
DPKRAKRILA NRQSAARSKE RKIKYTSELE RKLQTLQTEA TTLSAQLTLL QRDTSGLTTE  240
NRELKLRLQA MEEQAKLRDA LNDALREEVQ RLKIAAGQVP NMNGNPFNGG LPQQQQQMAS  300
YFSQPQQMQY FGGHQVQHHR PNHQPQNSSN GGRSLNDSMD FV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001141497.1	1e-165	uncharacterized LOC100273609
TrEMBL	A0A3L6F450	1e-164	A0A3L6F450_MAIZE; Transcription factor VIP1
TrEMBL	B4FWJ9	1e-164	B4FWJ9_MAIZE; BZIP transcription factor
STRING	GRMZM2G079365_P01	1e-165	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1925	38	92

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G43700.1	3e-41	VIRE2-interacting protein 1