PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00031.1.g01400.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 429aa    MW: 45571.4 Da    PI: 9.4823
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00031.1.g01400.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.29.6e-10109158150
                                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                                   eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kk l 
  Zjn_sc00031.1.g01400.1.am.mk 109 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNESMKKVLL 158
                                   89********************************************9775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.7E-7105157No hitNo description
SMARTSM003383.1E-6109173IPR004827Basic-leucine zipper domain
PfamPF001701.7E-8109157IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.531111155IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-5113156No hitNo description
CDDcd147022.57E-11114163No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MSDDSDEQRQ CRRGVGVHEL DAAMALADLA GVSPEPQKLH LQPAAAAERE EDEELASTGL  60
SLELGKVGIH SSSPCSSTSS AGHHRHHPAQ QQQVQAPVSV YGPRPTEAEK EAKRLRRVLA  120
NRESARQTIL RRQAIRDELA RKVADLSSQN ESMKKVLLSS HCDVLNFRSS LQLFPLRGEA  180
TCMIRRSMIL RFSRRTYRPV ATAVHLVSTA SVELRIARVR SSSGAISAES LRVARTTKKA  240
PAAARPSQHA VAPSAASPQT TPPQPSFLST VAPPTVLVPY VWGSWPPTTG HEHAGSPLAP  300
APLRLAPCAW YYPAAAVEPT SGGGSPAGAE TADEDTDDDP CSLTLAIDLD KRSAPIAIGS  360
SRAAEAGQQV GTERDKAVTT AEARKRRKEL TKLKHIHATA GRPGPVTGGI AGDGGDSTIA  420
FSVVAMATR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1383388RKRRKE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2457501e-49DQ245750.1 Zea mays clone 20079 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3B6KDZ03e-77A0A3B6KDZ0_WHEAT; Uncharacterized protein
TrEMBLA0A446SWI23e-77A0A446SWI2_TRITD; Uncharacterized protein
STRINGSi026452m4e-72(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.29e-10G-box binding factor 1