PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00028.1.g03130.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 902aa    MW: 99722.4 Da    PI: 5.9005
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00028.1.g03130.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.68.4e-0910721814128
                           NAM  14 lvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                                    v +yL + ++g++++ + +  i+++ iy+ eP  L  k++    +++ +fF+++ ++ +   +++r  + g W  + +  
  Zjn_sc00028.1.g03130.1.am.mk 107 FVAYYLPRLIAGEQVHPAICplIHRTSIYTDEPGVLAGKFDPtpVKDDRFFFTTAGERRPV--HARR--RPGSWALQRT-I 182
                                   689***********55444335**************85443322345789**999998775..3444..469**97765.7 PP

                           NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   +++++ ++ ++g  + L +    +++g+ tdW+m+ey+ 
  Zjn_sc00028.1.g03130.1.am.mk 183 DIMDEaGTVKIGELQRLSYR---KNDGVYTDWLMEEYSC 218
                                   77776477889999999995...89999*********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.47394240IPR003441NAC domain
PfamPF023656.8E-5107217IPR003441NAC domain
SuperFamilySSF1019416.93E-12108240IPR003441NAC domain
SuperFamilySSF561121.75E-82444711IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.202.1E-30444542No hitNo description
SMARTSM002208.3E-94445703IPR000719Protein kinase domain
CDDcd051173.77E-128445702No hitNo description
PROSITE profilePS5001146.746445703IPR000719Protein kinase domain
PfamPF000694.7E-73446703IPR000719Protein kinase domain
PROSITE patternPS001070451478IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.101.0E-58543732No hitNo description
PROSITE patternPS001080565577IPR008271Serine/threonine-protein kinase, active site
Gene3DG3DSA:1.10.238.102.5E-46735887IPR011992EF-hand domain pair
SuperFamilySSF474731.01E-47743883IPR011992EF-hand domain pair
PROSITE profilePS5022215.071746781IPR002048EF-hand domain
SMARTSM000547.0E-6750778IPR002048EF-hand domain
CDDcd000512.72E-18751810No hitNo description
PfamPF134991.2E-13751811IPR002048EF-hand domain
PROSITE patternPS000180759771IPR018247EF-Hand 1, calcium-binding site
PROSITE profilePS5022212.282782817IPR002048EF-hand domain
SMARTSM000542.0E-4786814IPR002048EF-hand domain
PROSITE patternPS000180795807IPR018247EF-Hand 1, calcium-binding site
PROSITE profilePS5022214.737818853IPR002048EF-hand domain
PfamPF134991.5E-13821883IPR002048EF-hand domain
SMARTSM000540.0016822850IPR002048EF-hand domain
CDDcd000513.74E-18826883No hitNo description
PROSITE patternPS000180831843IPR018247EF-Hand 1, calcium-binding site
PROSITE profilePS5022211.891856888IPR002048EF-hand domain
SMARTSM000544.6E-7857885IPR002048EF-hand domain
PROSITE patternPS000180866878IPR018247EF-Hand 1, calcium-binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 902 aa     Download sequence    Send to blast
MSDYYGCCLH RVYDDIDEEI PEEDDGRAGA SVTLKKSHEI FRFPCAWRGD LPPFSFRATD  60
FHPSYKSNPR HPTSFPHPRF NDKPHSFPCF SPVRESRWRS RSRVPSFVAY YLPRLIAGEQ  120
VHPAICPLIH RTSIYTDEPG VLAGKFDPTP VKDDRFFFTT AGERRPVHAR RRPGSWALQR  180
TIDIMDEAGT VKIGELQRLS YRKNDGVYTD WLMEEYSCAR SVKDAVVGDK ECVFCRVYVS  240
PNAATNNNKK PPPLIIDAAT PPPQILASPS SKRIEAAPES SIGSPSSPTS PRPCTPRPPC  300
SPAHGSPWSP TYEPAEEEET ATGPENPAAA VDDDFDELIN NFKVSLPADA PDADEHDERQ  360
RALPANMGQC CAKGVENAAA AADDDKGPTL KPMPEGPSHG ASSHNGPRPS SAAAAAATPG  420
GNGSKPAAAV GPVLGRPMAD VRATFSVGKE LGRGQFGVTH LCTHKATGEK LACKTIAKRK  480
LASKEDVDDV RREVQIMHHL SGQPNVVDLK GAYEDKHNVH LVMELCAGGE LFDRVIAKGQ  540
YTERAAASLL RTIVQIVHTC HSMGVMHRDI KPENFLLLSK DEDAPLKATD FGLSVFFKEG  600
EVFRDIVGSA YYIAPEVLKR KYGPEADIWS VGVMLYIFLA GVPPFWAENE NGIFTAILRG  660
QIDLASDPWP NISSGAKDLV KKMLNINPKE RLTAFQVLNH PWIKEDGDAP DTPLDNVVLN  720
RLKQFRAMNQ FKKAALRIIA GCLSEEEITG LKEMFKNIDK DNSGTITLEE LKNGLAKHGT  780
KLSDTEIQQL MDAADADGNG LIDYDEFVTA TVHMNKLDRD DHLYTAFQYF DKDNSGYITK  840
EELEQALKEQ GLYDAEEIKE VITDADTDND GRIDYSEFVA MMRKGTAGHE TTNHKKRRDL  900
VL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4ieb_A8e-9940988415503Calmodulin-domain protein kinase 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay play a role in signal transduction pathways that involve calcium as a second messenger. {ECO:0000250|UniProtKB:Q06850}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978350.20.0calcium-dependent protein kinase 25-like isoform X1
RefseqXP_004980140.10.0calcium-dependent protein kinase 25-like
SwissprotQ2RAV00.0CDPKP_ORYSJ; Calcium-dependent protein kinase 25
TrEMBLA0A368S5220.0A0A368S522_SETIT; Uncharacterized protein
STRINGSb08g001380.10.0(Sorghum bicolor)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.23e-20WRKY family protein
Publications ? help Back to Top
  1. Asano T,Tanaka N,Yang G,Hayashi N,Komatsu S
    Genome-wide identification of the rice calcium-dependent protein kinase and its closely related kinase gene families: comprehensive analysis of the CDPKs gene family in rice.
    Plant Cell Physiol., 2005. 46(2): p. 356-66
    [PMID:15695435]
  2. Wang CW, et al.
    OIP30, a RuvB-like DNA helicase 2, is a potential substrate for the pollen-predominant OsCPK25/26 in rice.
    Plant Cell Physiol., 2011. 52(9): p. 1641-56
    [PMID:21771866]