PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00026.1.g01270.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 298aa    MW: 32435.2 Da    PI: 7.0879
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00026.1.g01270.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.1e-11160205550
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                                   kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Zjn_sc00026.1.g01270.1.am.mk 160 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 205
                                   8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.9E-14156220IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.76158214IPR004827Basic-leucine zipper domain
PfamPF001704.7E-10160210IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.62E-11160214No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-14160214No hitNo description
CDDcd147031.86E-24161211No hitNo description
PROSITE patternPS000360163178IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MAQLPPKVPT MAPAWPEFGG SHHRHHHQHQ RSPSVGALLA AAPMPPLPAH HAQQQPSWVD  60
EFLDFSAAKR GAHRRTVSDD NAGVGAHEFD RLDDDQLLSM FADDLAPPIP QTAPAQSSSS  120
PSDHNSFNDE KPEKGEKEEA QSKCKGDGAA SAAPAPVDPK RVKRILANRQ SAQRSRVRKL  180
QYISELERSV TSLQTEVSAL SPRVAFLDHQ RSLLTLGNSH LKQRIAALAQ DKIFKDAHQE  240
ALKKEIQRLR QIYHQQVLQN AESPTTDDPP IRSDEDVLIA ASEGTAAAAA AAAPCPPS
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0612661e-131BT061266.1 Zea mays full-length cDNA clone ZM_BFb0128B20 mRNA, complete cds.
GenBankKJ7275571e-131KJ727557.1 Zea mays clone pUT5417 bZIP transcription factor (bZIP117) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968609.11e-133basic leucine zipper 2
SwissprotQ5QNI51e-100BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLA0A3B6ATW91e-133A0A3B6ATW9_WHEAT; Uncharacterized protein
STRINGTraes_2AS_6EA1E372F.11e-134(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-86bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]