PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00016.1.g05190.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 352aa    MW: 39438.3 Da    PI: 11.5589
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00016.1.g05190.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.63e-14232289461
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                                    ++ +r+ +NRe+ArrsR+RK++++eeL  +v+ L+aeN + + ++ +   e +k++ 
  Zjn_sc00016.1.g05190.1.am.mk 232 ERKRKRMLSNRESARRSRARKQQRLEELVAEVARLQAENAQVQARIATFDAELSKVDG 289
                                   46789999**********************************9999998888887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.7E-19229293IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.656231294IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.1E-12231286No hitNo description
SuperFamilySSF579592.0E-10233285No hitNo description
PfamPF001701.5E-10233286IPR004827Basic-leucine zipper domain
CDDcd147021.59E-6234278No hitNo description
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MACGFLRRRW RGYLFSGDRP SCRPIRAASA VGGRRTNSHL PPISHPDGGF CSRGPHHSLF  60
PSSTTLCEWS DLYEVDELSS RRGLVRARFQ HCSTLAPGKN MPSTIPLRKI PKLALGTAIN  120
RPLRVTSETF PISASFRVIH HHAVVPLPSF LAAKPPLPCL PTRSSDERRR PMKVRVPRRR  180
RSHSFSVAFL YWKVRPFLEP IPFVPTMSSS RRSSSPDSHT DGSNGGGFAA DERKRKRMLS  240
NRESARRSRA RKQQRLEELV AEVARLQAEN AQVQARIATF DAELSKVDGD NAVLRARHGE  300
LANRLEALTG VLEVFQMAGA PVDIPEIPDP LLRPWQPPFP MQPIAADVPF QY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1245252RRSRARKQ
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188635100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.15e-24basic region/leucine zipper motif 53