PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00015.1.g06700.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 207aa    MW: 22631.2 Da    PI: 11.6354
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00015.1.g06700.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.73.5e-30201631128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 
                                   lppGfrF+Ptdeelv +yL++k+ g +l++++vi+ v d+y ++Pwd+p    a++ e yfF+ r  +     r++     
  Zjn_sc00015.1.g06700.1.sm.mk  20 LPPGFRFKPTDEELVLQYLRRKALGVPLPAADVITVVrDLYGLDPWDIP---GASDGEKYFFAIRPAAGVDRPRAKT--Gg 95 
                                   79*********************************999***********...3467899*****9998765444444..23 PP

                           NAM  80 ....sgyWkatgkdkevlsk....kgelvglkktLvfy...........kgrapkgektdWvmheyrl 128
                                       sg+Wk  gk+++v+      ++ lvg k+ L+f            +++a  g  t Wvmheyrl
  Zjn_sc00015.1.g06700.1.sm.mk  96 ampaSGRWKPEGKERPVVLPrpcgGSLLVGAKRALAFAprrrgkkstnkQASAAAGLTTGWVMHEYRL 163
                                   34459*************9989877778**********9998887776556788888*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-3416168IPR003441NAC domain
PROSITE profilePS5100535.15220180IPR003441NAC domain
PfamPF023653.0E-1921163IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MERAPALVRH AGGVATLRQL PPGFRFKPTD EELVLQYLRR KALGVPLPAA DVITVVRDLY  60
GLDPWDIPGA SDGEKYFFAI RPAAGVDRPR AKTGGAMPAS GRWKPEGKER PVVLPRPCGG  120
SLLVGAKRAL AFAPRRRGKK STNKQASAAA GLTTGWVMHE YRLATALLHK NTLLFQWNHH  180
TTVTSESSVG GRWHKLLRSS RRSVSIA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-201916314140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147463.18e-71uncharacterized LOC100281072
TrEMBLB6SRZ12e-69B6SRZ1_MAIZE; NAC domain-containing protein 68
STRINGSi014408m4e-69(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118183140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-29NAC domain containing protein 83