PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00015.1.g05810.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 286aa    MW: 29964.3 Da    PI: 8.9435
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00015.1.g05810.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.91.1e-12114157955
                           AP2   9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++grW++eIr p++   r++ ++g+f t+eeAa a++aa  +++g
  Zjn_sc00015.1.g05810.1.am.mk 114 RRRQGRWASEIRMPRT---RAKLWIGTFATPEEAALAYDAAVFCFYG 157
                                   678**********965...4*********************999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.372106169IPR001471AP2/ERF domain
CDDcd000181.88E-19112171No hitNo description
SMARTSM003805.9E-18114175IPR001471AP2/ERF domain
PfamPF008473.3E-7114157IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-13114169IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.1E-19114170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MARKLVALWP CHVARVVVVT ELVSHLSPLA SSPLHSHTAS LSSFDLLVVR GSCLVPFLLA  60
ASVVSMAGAA ASRATGVAGM GNGRSTAPQG NNHGALSGAG GGGGPKNLGW LGARRRQGRW  120
ASEIRMPRTR AKLWIGTFAT PEEAALAYDA AVFCFYGARV PDSRRLNFPT APRPNISENM  180
RVRLTVSNIK AIAEHYARTL AVYLVPPPPP VLLPVPAPAP AVPAPMMVNE APVEATAASA  240
AGAACATTNH GNVNAKDVDS GAATVEDYFL NFNPEEFDFD HLMADI
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.12e-17ERF family protein