PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00015.1.g05350.1.sm.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

EIL

Protein Properties

Length: 372aa MW: 40952.9 Da PI: 5.5012

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00015.1.g05350.1.sm.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	171.2	1.1e-52	38	152	1	117
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekg 81 +el +rmwkd+++l+r++er+++l+ ++ + +++k++k ++qa rkkm+raQ giLkYMlk mevcna+GfvYgiipekg Zjn_sc00015.1.g05350.1.sm.mk 38 DELARRMWKDKIKLRRIQERQQRLVTQQLE--QKSKEKKLSDQALRKKMARAQNGILKYMLKLMEVCNARGFVYGIIPEKG 116 79*******************9966665..788899*************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 82 kpvegasdsLraWWkekvefdrngpaaiskyqaknl 117 kp +gasd++r+WWkekv+fd+ngpaai+ky+ +n Zjn_sc00015.1.g05350.1.sm.mk 117 KPISGASDNIREWWKEKVKFDKNGPAAIAKYEVENS 152 *****************************98875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	5.8E-53	38	154	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence Send to blast
MDHLTLLASE LGDAPDFEVG AIANLSENDV SDEEIDADEL ARRMWKDKIK LRRIQERQQR 60 LVTQQLEQKS KEKKLSDQAL RKKMARAQNG ILKYMLKLME VCNARGFVYG IIPEKGKPIS 120 GASDNIREWW KEKVKFDKNG PAAIAKYEVE NSRKSSPGLP PVAEHEVEMT QRNENPPEVL 180 RNSTHAMERS DQTENIFDQI EMVGVANQLT SPNHISTIGA LQQRGGSQGN FLAPNAVINN 240 YNGSQAATAA QSSIYLGDQS LPCESSNIAN SWSANSLQRG AVLGPNEFNP SPPLPMQQSR 300 VPFSMNYQAP VMGTGVMTES TSFTHQMAGS VTSRAVAGQA PQLMDDTSYT PADKSVFFNG 360 SSEASSMLNL YP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence Send to blast

MDHLTLLASE LGDAPDFEVG AIANLSENDV SDEEIDADEL ARRMWKDKIK LRRIQERQQR  60
LVTQQLEQKS KEKKLSDQAL RKKMARAQNG ILKYMLKLME VCNARGFVYG IIPEKGKPIS  120
GASDNIREWW KEKVKFDKNG PAAIAKYEVE NSRKSSPGLP PVAEHEVEMT QRNENPPEVL  180
RNSTHAMERS DQTENIFDQI EMVGVANQLT SPNHISTIGA LQQRGGSQGN FLAPNAVINN  240
YNGSQAATAA QSSIYLGDQS LPCESSNIAN SWSANSLQRG AVLGPNEFNP SPPLPMQQSR  300
VPFSMNYQAP VMGTGVMTES TSFTHQMAGS VTSRAVAGQA PQLMDDTSYT PADKSVFFNG  360
SSEASSMLNL YP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002445904.1	6e-85	ETHYLENE INSENSITIVE 3-like 3 protein
Refseq	XP_021320257.1	6e-85	ETHYLENE INSENSITIVE 3-like 3 protein
Refseq	XP_021320258.1	6e-85	ETHYLENE INSENSITIVE 3-like 3 protein
Refseq	XP_021320259.1	6e-85	ETHYLENE INSENSITIVE 3-like 3 protein
Refseq	XP_021320260.1	6e-85	ETHYLENE INSENSITIVE 3-like 3 protein
STRING	Sb07g027790.1	2e-84	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3720	37	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	5e-55	ETHYLENE-INSENSITIVE3-like 3