PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00015.1.g04420.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 225aa MW: 24485.2 Da PI: 7.6987 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.1 | 1.4e-11 | 111 | 166 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 e +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L +el++ +a Zjn_sc00015.1.g04420.1.sm.mk 111 EERRRRRMVSNRESARRSRMRKQRQLSELWAQVSHLRGANRRLLDELNRALRSCAD 166 67899******************************************998777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.8E-9 | 108 | 165 | No hit | No description |
SMART | SM00338 | 1.2E-11 | 109 | 173 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.4E-9 | 110 | 165 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.599 | 111 | 174 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.33E-10 | 113 | 161 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 116 | 131 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 5.21E-16 | 118 | 165 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MDHNFHGEVA SLRFLSPPNP SFATHHHMNM ALPPQAYFPP SFEPTSPFQE DPATAALLGG 60 DMDHMATFEF DTVVREAAHV VGGNGSPSSG SGSDGGGGGY PLNAAAASAE EERRRRRMVS 120 NRESARRSRM RKQRQLSELW AQVSHLRGAN RRLLDELNRA LRSCADARRE NARLKDEKAE 180 LAKKLEQLLQ APAVATEKSA EAGAYPSIHS CPSGPCNYTS TSTSE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 132 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00389 | DAP | Transfer from AT3G30530 | Download |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU976632 | 1e-94 | EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025821559.1 | 7e-91 | bZIP transcription factor 2-like | ||||
TrEMBL | A0A3L6PRK2 | 5e-93 | A0A3L6PRK2_PANMI; G-box-binding factor 1 | ||||
STRING | Pavir.Fb01824.1.p | 4e-80 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 3e-10 | basic leucine-zipper 58 |