PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zjn_sc00008.1.g05190.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 303aa MW: 32660.9 Da PI: 9.2671 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.7 | 2.1e-12 | 138 | 177 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+++NReAAr+sR+RKka+i++Le+ + ++Le+e Zjn_sc00008.1.g05190.1.sm.mkhc 138 KTLRRLAQNREAARKSRLRKKAYIQQLETgriRLAQLEQE 177 7789***********************9644466777666 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.2E-7 | 134 | 206 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.2E-10 | 134 | 183 | No hit | No description |
PROSITE profile | PS50217 | 8.657 | 136 | 179 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-9 | 138 | 178 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.13E-8 | 138 | 179 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 141 | 156 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.2E-23 | 215 | 289 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 303 aa Download sequence Send to blast |
MAYPSTSGMI QASSSLHGGT MRRDPEGYDM PSDLDQALLL YFDGHQTKPS IQEQPQTLNI 60 FPSQPMHVEP SPKGSMTTAA AATQVAGSSK PAKPAGGQLG GGKPALKKDG DVVGGSKRGG 120 GAAASSSDQV GPRTPDPKTL RRLAQNREAA RKSRLRKKAY IQQLETGRIR LAQLEQEIQM 180 ARNQGAMWGT GALSPDAALF NLEYERWLGD HRRLVARLRA AEEEHWPDAE LRSYADETAS 240 HYGALMALKA RVAAADPLHL LSGLWKGAAE RCLLWIGGFR PSELVKSVMS DVPMHAGVTG 300 EEE |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_025810392.1 | 1e-147 | transcription factor TGAL8-like isoform X2 | ||||
Swissprot | Q69T21 | 1e-124 | TGAL8_ORYSJ; Transcription factor TGAL8 | ||||
TrEMBL | A0A2S3HHY1 | 1e-148 | A0A2S3HHY1_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A3L6PH66 | 1e-146 | A0A3L6PH66_PANMI; Transcription factor HBP-1b(C38)-like isoform X1 | ||||
STRING | Pavir.Db00756.1.p | 1e-147 | (Panicum virgatum) | ||||
STRING | Pavir.J05543.1.p | 1e-149 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12972 | 21 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06839.3 | 9e-66 | bZIP family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|