PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00006.1.g01680.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family EIL
Protein Properties Length: 454aa    MW: 50366.1 Da    PI: 4.8982
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00006.1.g01680.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3345.79.9e-106413102261
                                   XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX...............XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                          EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn...............ksneqarrkkmsraQDgiLkYMlkemevc 67 
                                   +lkkrmwkdq ll++l++r+ + +   +++ +++k++               +++ ++rrk+m raQDg+L++Mlk+me+c
  Zjn_sc00006.1.g01680.1.sm.mk  41 DLKKRMWKDQLLLMKLEGRSGRDTRGGDVQQQQQKKQqpcqdqvvaskeqeeTPEARYRRKAMLRAQDGVLRHMLKMMEAC 121
                                   8******************9987766666544444335888888888888889**************************** PP

                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHH CS
                          EIN3  68 naqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLL 148
                                   na+GfvYg + e g pv+g+sd Lr+WWk++v fdr++p+a+         +sg+ ++ +++ s  + l+++qD+tlgSLL
  Zjn_sc00006.1.g01680.1.sm.mk 122 NARGFVYGVVGEDGVPVSGSSDGLRGWWKDDVGFDRAAPMALLPA------ASGGPGSPIAAASFLQGLHDIQDSTLGSLL 196
                                   ******************************************976......7899999999******************** PP

                                   HHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTT CS
                          EIN3 149 salmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirele 228
                                   sal+qhc+ppqr+fpl++g++pPWWPtG+e wwg +g ++++qg+ppy+kphdlkkawk+s+L+avikh+sp+++++r+l+
  Zjn_sc00006.1.g01680.1.sm.mk 197 SALIQHCEPPQRSFPLDRGLAPPWWPTGREPWWGLQGeAQAQQGAPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLV 277
                                   *************************************9999999************************************* PP

                                   TTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS
                          EIN3 229 rqskylqdkmsakesfallsvlnqeekecatvs 261
                                   +qsk+lq+kmsa++  ++++v++qee++ ++ +
  Zjn_sc00006.1.g01680.1.sm.mk 278 WQSKRLQHKMSARDAETWSRVISQEEALDRHAQ 310
                                   **************************9775332 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.4E-11041303No hitNo description
Gene3DG3DSA:1.10.3180.103.8E-62178310IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.79E-55183305IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MDDKMANGKA RLTDDDAAEP DSQEQFFSDS ESGSESIEIA DLKKRMWKDQ LLLMKLEGRS  60
GRDTRGGDVQ QQQQKKQQPC QDQVVASKEQ EETPEARYRR KAMLRAQDGV LRHMLKMMEA  120
CNARGFVYGV VGEDGVPVSG SSDGLRGWWK DDVGFDRAAP MALLPAASGG PGSPIAAASF  180
LQGLHDIQDS TLGSLLSALI QHCEPPQRSF PLDRGLAPPW WPTGREPWWG LQGEAQAQQG  240
APPYRKPHDL KKAWKISLLS AVIKHLSPRF DQMRKLVWQS KRLQHKMSAR DAETWSRVIS  300
QEEALDRHAQ RALHIAPIED EDDGGEDPPK EEAARGAHLD KRKRRDVGGD EGAGGSGSGM  360
QLLALPDIEG VPDVDRNSID ELMKLYYRWL QGTDGEHEND AAVVGAAGQS HSVVHETAQD  420
ARLHDDMFDD LPSVADVGDV SDFQNSPIWQ WVYD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A7e-461843076128Protein ETHYLENE INSENSITIVE 3
4zds_B7e-461843076128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0430830.0BT043083.1 Zea mays full-length cDNA clone ZM_BFc0091K23 mRNA, complete cds.
GenBankJX4699690.0JX469969.1 Zea mays subsp. mays clone UT3232 EIL-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025823375.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X1
SwissprotQ9FJQ53e-89EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A2T8ICJ40.0A0A2T8ICJ4_9POAL; Uncharacterized protein
STRINGGRMZM2G044322_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.12e-78EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]