PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00004.1.g06690.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family C2H2
Protein Properties Length: 421aa    MW: 44673.1 Da    PI: 9.5247
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00004.1.g06690.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.4e-05526223
                                  EETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                                  +C  C+++F ++  L  H+r H
  Zjn_sc00004.1.g06690.1.am.mk  5 TCRLCSRRFASPRALAGHMRAH 26
                                  6*******************99 PP
2zf-C2H211.30.001225247123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                   ++Cp+C ++Fs+   L  H r+H
  Zjn_sc00004.1.g06690.1.am.mk 225 HQCPHCFRVFSSGQALGGHRRSH 247
                                   79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.577427IPR007087Zinc finger, C2H2
SMARTSM003550.035426IPR015880Zinc finger, C2H2-like
PfamPF138944.0E-4526No hitNo description
SuperFamilySSF576673.04E-6526No hitNo description
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
SuperFamilySSF576673.04E-6156180No hitNo description
PfamPF139121.0E-9160185IPR007087Zinc finger, C2H2
PROSITE profilePS501578.517161190IPR007087Zinc finger, C2H2
SMARTSM0035555161181IPR015880Zinc finger, C2H2-like
PfamPF139123.9E-9225247IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.221225252IPR007087Zinc finger, C2H2
SMARTSM003550.15225247IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280227247IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MAKNTCRLCS RRFASPRALA GHMRAHSIAA AKSQISSASS ASTSVVAGGG AEKPVQGYVL  60
REKPKRRVRL AESDISDSES ETSGFPSSWP SAKHGHAAGS GDAEPVSSVS NGVTPEQDVA  120
MLLVMLSRDS WPLPPVMPSY QVDSDDECDA RQPIAQKRTR YECPACKKAF RSYQALGGHR  180
ASNVRGGKGG CCAPPPPLYT PPPSPMQPLL ARDGEEGGAW KPLPHQCPHC FRVFSSGQAL  240
GGHRRSHFCT APVAAEKTGA VPLPVPMKSL GFIDLNLPPT WDDVELSAVS DPFLSSKPAA  300
AAEPGLVLAA LPAAFLSLLL LSTTTGVFKL QPCFILLQLA GSSKKCFALT KYCAPYHLAL  360
QSFLSLRGGP ATLGPGTSVI RPRVGCSAVL FCVAESRRAR PGGRDAGPTW RPVRSRRDDW  420
N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16268KPKRRVR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004976448.11e-104zinc finger protein ZAT1
TrEMBLA0A3L6Q7111e-110A0A3L6Q711_PANMI; Zinc finger protein ZAT1-like
STRINGOPUNC04G18700.11e-107(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35183377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.13e-23C2H2-like zinc finger protein