PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00004.1.g00470.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 585aa    MW: 64460.1 Da    PI: 9.3569
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00004.1.g00470.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.11.5e-152876355
                             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                    ykGVr ++ +g+Wv+e+r p   g ++r++lg++ tae Aa+a++aa ++l+g
  Zjn_sc00004.1.g00470.1.sm.mkhc 28 YKGVRMRS-WGSWVSEVRAP---GAKARIWLGSHSTAEAAARAYDAALLCLRG 76
                                    9****998.*******9998...445*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.1E-252786IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-152787IPR016177DNA-binding domain
SMARTSM003803.3E-282792IPR001471AP2/ERF domain
PROSITE profilePS5103220.892786IPR001471AP2/ERF domain
PRINTSPR003672.0E-72839IPR001471AP2/ERF domain
CDDcd000182.74E-122888No hitNo description
PfamPF008471.8E-92876IPR001471AP2/ERF domain
PRINTSPR003672.0E-75066IPR001471AP2/ERF domain
CDDcd005191.35E-50252493No hitNo description
Gene3DG3DSA:3.40.50.18201.8E-44258497IPR029058Alpha/Beta hydrolase fold
SuperFamilySSF534747.96E-38259497IPR029058Alpha/Beta hydrolase fold
PfamPF017648.2E-40315478IPR002921Fungal lipase-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006629Biological Processlipid metabolic process
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    Send to blast
MVKTAALCND TAAPAPAAAK RNGGKRAYKG VRMRSWGSWV SEVRAPGAKA RIWLGSHSTA  60
EAAARAYDAA LLCLRGSAAA ADLNFPVQLP VDGLPSATAM SPKSIQRVAA AAAAAGATAF  120
ADFMVLRPDK GGARTLLHLL CSCDVAANDA VDCPVGTEVA ERWRRWAIFV SLVAQMLLMW  180
VKKPLAALGR AVEYWMNLVT DNGGSVTMVV RNAMRRKLRI PDRHSSKYRS FIGLIDSRID  240
LDKKIKTGDS NYHAALGIMA AKLAYENKLV IENVVNKHWE MNFLEYFNCW NEFRGDYTTQ  300
AFMFADKPAD AELAVVAFRG TQPFDAEQWC TDVDFSWYEI PGVGKVHGGF MKALGLQCTG  360
WPAEPADQTR GGTETRQFAY YAIREKLRAF LDANPRARFV VTGHSLGGAL AVLFPTVLAL  420
HGQAALLHRL AGVYTYGQPR VGDARLGEFV ARHLDDLPRR YFRFVYCNDV VPRVPYDDAT  480
LLFKHFGRCV YVDSLYRARS PAEEPNKNYF SPLFVVPKYA NAAWELVRGF LIGYVDGPEY  540
AEGWVMRAAR AVGLIIPGLP PHSPLDYVNA TRLGGASLDL LLRDH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964905.10.0uncharacterized protein LOC101777571
TrEMBLA0A1E5WAP90.0A0A1E5WAP9_9POAL; Uncharacterized protein
TrEMBLK3XWP40.0K3XWP4_SETIT; Uncharacterized protein
STRINGSi006352m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-21ERF family protein