PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSVIVT01014246001
Common NameVIT_19s0014g01780
Organism
Vitis vinifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
Family bZIP
Protein Properties Length: 310aa    MW: 34064 Da    PI: 7.3705
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSVIVT01014246001genomeGenoscopeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.9e-11173218550
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                        kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  GSVIVT01014246001 173 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 218
                        8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-13169233IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.726171223IPR004827Basic-leucine zipper domain
PfamPF001701.1E-9173217IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.85E-11173227No hitNo description
Gene3DG3DSA:1.20.5.1705.3E-12173224No hitNo description
CDDcd147035.52E-24174224No hitNo description
PROSITE patternPS000360176191IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MTQNWPSFPH QRMPSMAAPA LLPAATATTT SQHPSWVDEF LDFSSSRRGS HRRSVSDSIA  60
FLEAPVLVEE ARHSHATMLH GANGFDRLDD DQLMSMFSDD ISLTVPPTVS SSGPSTPSDQ  120
NSNNDEKGDE KGAALDQQPP KNEPGEVESS CKTELPSFRP STASNGDSII DPKRVKRILA  180
NRQSAQRSRV RKLQYISELE RSVTSLQTEV SALSPRVAFL DHQRLILNVD NSALKQRIAA  240
LAQDKIFKDA HQEALKKEIE RLRQVYHQQS LKKMGNSATG APPQSTTRPH QTTTTDAAMG  300
CTDKVQLLN*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Vvi.123850.0fruit
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4361420.0AM436142.2 Vitis vinifera contig VV78X056855.7, whole genome shotgun sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002285311.20.0PREDICTED: basic leucine zipper 34
SwissprotQ9M2K41e-105BZP61_ARATH; Basic leucine zipper 61
TrEMBLE0CSC70.0E0CSC7_VITVI; Uncharacterized protein
STRINGVIT_19s0014g01780.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.19e-87bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]