PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun010635 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | VOZ | ||||||||
Protein Properties | Length: 183aa MW: 20919.3 Da PI: 8.4213 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 244.2 | 2.3e-75 | 2 | 126 | 94 | 217 |
VOZ 94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdek 193 elfd+++legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp++ fewhlyeyei+++da+alyrlelklvd+k Vun010635 2 ELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDACALYRLELKLVDGK 101 9*************************************************************************************************** PP VOZ 194 ksakgk.vskdsladlqkklgrlta 217 ks+k+k ++ ds+adlqk++g+l+a Vun010635 102 KSSKTKiITGDSVADLQKHMGSLSA 126 ******5578************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
XELFDICVLE GETIREWLFF DKPRRAFESG NRKQRSLPDY SGRGWHESRK QVMNEFGGLK 60 RSYYMDPQPL NLFEWHLYEY EISKCDACAL YRLELKLVDG KKSSKTKIIT GDSVADLQKH 120 MGSLSAEFHS DSNKRSAKGS RTKLGIGGGV YSASNRPALL NAPYQYGLTA PYDFVVDNTS 180 DYM |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027933409.1 | 1e-131 | transcription factor VOZ1-like | ||||
Swissprot | Q9SGQ0 | 4e-76 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A4D6KJV4 | 1e-130 | A0A4D6KJV4_VIGUN; Uncharacterized protein | ||||
STRING | XP_007148099.1 | 1e-127 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 2e-78 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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