PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun009736 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | HB-other | ||||||||
Protein Properties | Length: 219aa MW: 24827.4 Da PI: 7.1317 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 69.3 | 4.6e-22 | 121 | 176 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe+lF+++++p++++r eL+++l+L++rqVk+WFqNrR+++k Vun009736 121 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMK 176 688999***********************************************999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 3.76E-22 | 104 | 178 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.2E-22 | 109 | 178 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.75 | 118 | 178 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.1E-19 | 119 | 182 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 1.7E-19 | 121 | 176 | IPR001356 | Homeobox domain |
CDD | cd00086 | 8.80E-19 | 121 | 178 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 153 | 176 | IPR017970 | Homeobox, conserved site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MSFGGFLEAK QSGGGGRIVS DIPYSNGSNH SNDIMPSGAI SQPRLATPTL AKSMFNSPGL 60 SLALQSDVDG QGDMNRLMPE NFEQNGLRRS REEEHESRSG SDNMDGASGD DFDAADNPPR 120 KKRYHRHTPQ QIQELEALFK ECPHPDEKQR LELSRRLNLE TRQVKFWFQN RRTQMKTQLE 180 RHENSLLRQE NDKLRAENMS MREAMRNPMC SNCGGPAMX |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027929812.1 | 1e-156 | homeobox-leucine zipper protein ANTHOCYANINLESS 2-like | ||||
Swissprot | Q0WV12 | 2e-88 | ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
TrEMBL | A0A4D6NHU6 | 1e-155 | A0A4D6NHU6_VIGUN; Homeobox-leucine zipper protein | ||||
STRING | XP_007139955.1 | 1e-155 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.2 | 1e-72 | HD-ZIP family protein |
Publications ? help Back to Top | |||
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