PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vun009535 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | WRKY | ||||||||
Protein Properties | Length: 227aa MW: 25512.2 Da PI: 6.2545 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 61.7 | 1.3e-19 | 175 | 217 | 13 | 55 |
E--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES- CS WRKY 13 KevkgsefprsYYrCtsagCpvkkkversaedpkvveitYege 55 K vk+s+fprsYYrCts +C+vkk+vers +dp+vv++tYe + Vun009535 175 KAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEAN 217 99**************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03106 | 1.0E-12 | 174 | 216 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.9E-14 | 175 | 221 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.1E-16 | 175 | 217 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.855 | 175 | 223 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.62E-14 | 175 | 216 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MEKKEMVVKT EDAVGSSSFP CYNSNVYPFS NAFDFSEVEK SSLGFMELLG VQDYSPLLEL 60 PQLSTVSAPH HSTVKAPSDN GKECSEVLNH QPATPNSSSI SSASSDAVND EQNKTLDQVE 120 EDDDEEEEGQ HKTKKQLKPK KTNQKRQREP RFAVHDEKRG RSSGRWVQME EVRSKAVKNS 180 PFPRSYYRCT SVSCNVKKRV ERSFTDPSVV VTTYEANTHI QAQLCLA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027935075.1 | 1e-112 | WRKY transcription factor 23-like | ||||
Swissprot | O22900 | 8e-35 | WRK23_ARATH; WRKY transcription factor 23 | ||||
TrEMBL | A0A1S3V6F6 | 1e-107 | A0A1S3V6F6_VIGRR; WRKY transcription factor | ||||
STRING | GLYMA10G01450.2 | 1e-103 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 2e-27 | WRKY DNA-binding protein 23 |
Publications ? help Back to Top | |||
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