PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun008451

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

EIL

Protein Properties

Length: 268aa MW: 30116.5 Da PI: 10.355

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45819128	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	403.9	2e-123	4	236	30	265
X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.... CS EIN3 30 aatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqter 129 +a++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++raWWkekv+fd+ngpaai+ky+a++l++s+++++ ++ Vun008451 4 QAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNS--RN 101 568999***********************************************************************************99988..78 PP XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTT CS EIN3 130 sseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeireler 229 ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww++l l++ q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++r Vun008451 102 GNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPHGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVR 200 999999***************************************************9.9******************************** PP TSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX CS EIN3 230 qskylqdkmsakesfallsvlnqeekecatvsahss 265 qsk+lqdkm+akes+++l vl++ee+++++ s++s Vun008451 201 QSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDSG 236 ****************************999975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	9.2E-120	4	225	No hit	No description
Gene3D	G3DSA:1.10.3180.10	2.5E-72	100	233	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamily	SSF116768	1.15E-62	106	229	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence Send to blast
XIQQAAEKQK PRQSSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG 60 SSDNIRAWWK EKVKFDKNGP AAIAKYEAEC LAMSEADNSR NGNSQSILQD LQDATLGSLL 120 SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE DWWSQLNLPH GQSPPYKKPH DLKKMWKVGV 180 LTAVIKHMSP NIAKIRRHVR QSKCLQDKMT AKESAIWLGV LSREEALIRQ PSSDSGTSGV 240 TGCYLVFLLR KQAASSAATM MLMVLMMX

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wij_A	2e-77	105	236	9	140	ETHYLENE-INSENSITIVE3-like 3 protein
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Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027928184.1	1e-178	ETHYLENE INSENSITIVE 3-like 3 protein
Refseq	XP_027928185.1	1e-178	ETHYLENE INSENSITIVE 3-like 3 protein
Swissprot	O23116	1e-144	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A4D6NB40	1e-176	A0A4D6NB40_VIGUN; Ethylene-insensitive protein 3
STRING	XP_007150399.1	1e-176	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	1e-146	ETHYLENE-INSENSITIVE3-like 3

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]