PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Vun004826 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | NAC | ||||||||||||
Protein Properties | Length: 209aa MW: 23928 Da PI: 9.8682 | ||||||||||||
Description | NAC family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.7 | 2.1e-31 | 16 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 lp GfrF Ptd+el+ +yLk+k+ +++l++ +vi+e+di++++P Lp + +++ yfFs+ k ++r++ sg Wk gk+ke+ + ++e+ Vun004826 16 LPIGFRFCPTDQELLLHYLKNKAFAQQLPA-SVIPETDIFQTHPCLLPGDL---REKRYFFSNCGK------VNKRSAGSGCWKYVGKEKEIRVCeSNEV 105 699***************************.99***************543...4578****9866......467999**************88657888 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kktL+f kg++++ +t+Wvmhe rl Vun004826 106 IGMKKTLIFCKGSHET--RTRWVMHELRL 132 **********888877..9*******987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.23E-38 | 10 | 153 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.035 | 16 | 153 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-20 | 17 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MEGFEEGFVV KGGIKLPIGF RFCPTDQELL LHYLKNKAFA QQLPASVIPE TDIFQTHPCL 60 LPGDLREKRY FFSNCGKVNK RSAGSGCWKY VGKEKEIRVC ESNEVIGMKK TLIFCKGSHE 120 TRTRWVMHEL RLVTSYAYQM AVADFAVYVI FQKRKKTPKA SQQRPFCSSK LQRVHDVKPS 180 IMDFDHDNIL LPPPSSPSLL QTVVKLLRT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-20 | 14 | 132 | 13 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027923726.1 | 1e-151 | NAC domain-containing protein 83-like | ||||
TrEMBL | A0A0L9VMI6 | 1e-120 | A0A0L9VMI6_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3T9I0 | 1e-120 | A0A0S3T9I0_PHAAN; Uncharacterized protein | ||||
STRING | XP_007151796.1 | 1e-103 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-37 | NAC domain containing protein 83 |