PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Vun004583 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | NAC | ||||||||||||
Protein Properties | Length: 218aa MW: 24626.2 Da PI: 9.2606 | ||||||||||||
Description | NAC family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 81.2 | 2.2e-25 | 28 | 153 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel. 99 lp+G+rF+Ptd l +yL+k+++g++l+ i + d++++ePw+Lp k + + +fF + + ++ ++r + +g W+ kd+ev +++l Vun004583 28 LPVGYRFDPTDPVLAGYYLTKRLRGHPLPN-GLILDYDVHQTEPWELPGGGKFMNWQKFFFYNVKGLNP----EKRDAGKGQWEMVEKDEEVEFYDEQLa 122 799************************999.89***************543333335588877766654....6888999************98766556 PP NAM 100 ..vglkktLvfykgrapkgektdWvmheyrl 128 + k +Lvf+k + ++ kt+Wvmhe+rl Vun004583 123 plTAKKSVLVFWKSKGNSLAKTKWVMHEFRL 153 76888999*********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.84E-30 | 24 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 32.452 | 28 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.0E-15 | 29 | 153 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
GSLQSQKVFG VASLMEVFNP VEGKTYKLPV GYRFDPTDPV LAGYYLTKRL RGHPLPNGLI 60 LDYDVHQTEP WELPGGGKFM NWQKFFFYNV KGLNPEKRDA GKGQWEMVEK DEEVEFYDEQ 120 LAPLTAKKSV LVFWKSKGNS LAKTKWVMHE FRLALKSNPS KMSAMGVCRI FERKTSKRAK 180 RARVSTEGVS NAEEAMEVID FTVECGTETS PPPPPGTP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 6e-16 | 28 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-16 | 28 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-16 | 28 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-16 | 28 | 176 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
3swm_B | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
3swm_C | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
3swm_D | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
3swp_A | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
3swp_B | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
3swp_C | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
3swp_D | 6e-16 | 28 | 176 | 20 | 171 | NAC domain-containing protein 19 |
4dul_A | 6e-16 | 28 | 176 | 17 | 168 | NAC domain-containing protein 19 |
4dul_B | 6e-16 | 28 | 176 | 17 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027920185.1 | 1e-151 | NAC domain-containing protein 83-like | ||||
TrEMBL | A0A4D6M7Y2 | 1e-150 | A0A4D6M7Y2_VIGUN; Uncharacterized protein | ||||
STRING | XP_007161703.1 | 2e-95 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 1e-22 | NAC domain containing protein 38 |