PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun004430

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 223aa MW: 25986.8 Da PI: 7.1499

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45801906	PU_unref	Unigene	View CDS
PUT-167a-Vigna_unguiculata-31447	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.6	4.1e-16	104	162	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ rr+++NRe+ArrsR RK++ ++eL v L +eN++L+++l++ +++ +++ +e+ Vun004430 104 RKHRRMISNRESARRSRMRKQKHLDELWSQVMWLRNENHQLIDKLNHVSENHDQVLQEN 162 578***********************************************999998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-13	100	164	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.484	102	165	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.4E-12	104	176	No hit	No description
SuperFamily	SSF57959	2.74E-13	104	154	No hit	No description
Pfam	PF00170	1.8E-14	104	162	IPR004827	Basic-leucine zipper domain
CDD	cd14702	7.70E-19	105	156	No hit	No description
PROSITE pattern	PS00036	0	107	122	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence Send to blast
ELSLHHSPLY LPPPFCKTKT MQTREVSALN YLLPSNPSPY PPNNNFTTLQ NNIPTFQFQR 60 FSTQLYGHNH NTTPYDFSPQ SSCISSNSTS DEADEHQLTL INERKHRRMI SNRESARRSR 120 MRKQKHLDEL WSQVMWLRNE NHQLIDKLNH VSENHDQVLQ ENPQLKEQAS ELRQMIRDMQ 180 IHSPSPSFTP FQDHDVPCST SPFLRSDSSN QSNSCNNNMD LLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	123	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269\|PubMed:26973252}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027923752.1	1e-147	basic leucine zipper 43-like
Swissprot	Q9FMC2	3e-42	BZP43_ARATH; Basic leucine zipper 43
TrEMBL	A0A4D6LZU1	1e-145	A0A4D6LZU1_VIGUN; Extracellular signal-regulated kinase 1/2
STRING	GLYMA13G06980.1	3e-97	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	3e-52	basic leucine-zipper 42

Publications ? help Back to Top
Nowak K,Gaj MD Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis. J. Plant Physiol., 2016. 193: p. 119-26 [PMID:26973252] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]