PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun003060
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 275aa    MW: 31405.8 Da    PI: 6.2602
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45799315PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-7945PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.13.3e-126297236
               XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHH CS
     bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLee.kvk 36
               +++k+ rr ++NReAAr++R+RKka++++Le+ +vk
  Vun003060 62 PDRKVLRRQAQNREAARKCRLRKKAYVQQLETsRVK 97
               57899*************************962444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-857107No hitNo description
SMARTSM003383.1E-560121IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.7266398IPR004827Basic-leucine zipper domain
PfamPF001703.5E-964100IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-76798No hitNo description
PROSITE patternPS0003606883IPR004827Basic-leucine zipper domain
PfamPF141441.9E-26153226IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MGIYDPFHQV DMWGDSFKID GSLNSIATPM FMMKPSMQNK SECTPHESRE PSGDDQDSNE  60
KPDRKVLRRQ AQNREAARKC RLRKKAYVQQ LETSRVKLMQ LELEIEKAKK QGMYIRSAPD  120
VSYMGSSGTI NPGITLFELE YGQWIEELDR QNEELRNALH TRESDMQLHL LVESCLSHYA  180
NLFRIKAEAA KADVFYLISG AWKASVERLY LWIGGSRPSQ LLNIIVPQLE PLTDQQIVSI  240
NNLRLSSQQA EDALSLGLDK LQQSLVHNIP SDPLI
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027942013.10.0transcription factor TGA7-like
RefseqXP_027942014.10.0transcription factor TGA7-like
RefseqXP_027942015.10.0transcription factor TGA7-like
SwissprotQ93ZE23e-96TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A4D6MG570.0A0A4D6MG57_VIGUN; Transcription factor TGA
STRINGXP_007141120.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-98bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]