PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Vun002696 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | WRKY | ||||||||||||
Protein Properties | Length: 290aa MW: 33005.7 Da PI: 7.0753 | ||||||||||||
Description | WRKY family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 81.5 | 8.7e-26 | 121 | 180 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqKe+ +++fpr+YYrCt++ gC+++k+v+r +edp + +++Y geH ++ Vun002696 121 DDGHQWRKYGQKEILNAKFPRNYYRCTHRdqGCQATKQVQRVQEDPILYKTIYYGEHSCK 180 8***************************9999*************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 9.1E-27 | 106 | 181 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.449 | 115 | 178 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.41E-25 | 118 | 180 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.4E-36 | 120 | 181 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-25 | 121 | 180 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MDNLSGSTSR KKAIEELLRG RDSATQLRSV INGNGEDLSS AKKLVKEVLM SFTNSLLLLN 60 TSNTTSEFHD DVSNVQLWDS PKLEDSQESN CKNSTVKARR GCYKRRRTEQ TREKESKAPI 120 DDGHQWRKYG QKEILNAKFP RNYYRCTHRD QGCQATKQVQ RVQEDPILYK TIYYGEHSCK 180 SLTNPEIILD PMSPSSSSKF LSFNNSFPTP SKQDCPFLSS SFPSSSVKRE CKEEIPPSTS 240 SNDYLISSDL TFDGSPKHVT LSSSTLDSEY KAVDIPDVFD DVFEHFFEFR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 3e-19 | 120 | 180 | 8 | 69 | OsWRKY45 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027926250.1 | 0.0 | WRKY DNA-binding transcription factor 70-like | ||||
TrEMBL | A0A0L9TCQ9 | 1e-172 | A0A0L9TCQ9_PHAAN; Uncharacterized protein | ||||
STRING | XP_007140073.1 | 1e-155 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 5e-30 | WRKY DNA-binding protein 70 |