PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun001400
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 372aa    MW: 42073.8 Da    PI: 5.4285
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45803143PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-23544PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.4e-29128189159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                ldDgy+WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs+edp+++e+tY+g+H+++
  Vun001400 128 LDDGYSWRKYGQKDILGAKFPRGYYRCTHRnvqGCLATKQVQRSDEDPTTIEVTYRGRHTCT 189
                59***************************98999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-28120190IPR003657WRKY domain
PROSITE profilePS5081123.319123186IPR003657WRKY domain
SuperFamilySSF1182901.12E-25127190IPR003657WRKY domain
SMARTSM007744.7E-41128190IPR003657WRKY domain
PfamPF031066.2E-27129188IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MEASPKRKHS SLIHELIQGK ELAKQLGNHL VSSSPSSHET NELLVDKILS SYEKVLTMLN  60
WGATVGEAKT TSATLMDSHS SFTNGGSPKS EVVDRELEHK AVLKKRKTMP RWTEQVKICS  120
RTGLEGSLDD GYSWRKYGQK DILGAKFPRG YYRCTHRNVQ GCLATKQVQR SDEDPTTIEV  180
TYRGRHTCTQ AKYLNKVFPS NIKMGLGENQ FHNDQTNQPL EEKIQQTPVG IFAFETEHRV  240
KREELEIKED IFPWFSFHSQ SNGSENGDNM LPESNFENHF TESFSPAFIS PETSESNPFC  300
LSTCYLDNTE LLCQQIQTSD SDITETFSAP TSVTNSPILD LDILLHKGDF DTDFPFNNPD  360
FFSSFELPCT ST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-20127188768OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027930440.10.0probable WRKY transcription factor 46
TrEMBLA0A4D6KM440.0A0A4D6KM44_VIGUN; WRKY transcription factor 29
STRINGXP_007147293.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.12e-53WRKY DNA-binding protein 30