PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g10340.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 224aa    MW: 24396.7 Da    PI: 9.8955
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g10340.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.2e-11104151455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +     +K   Ka +L + ++YI+sLq
  Vang11g10340.1 104 SHSLAERARREKISERMKILQDLVPGC-----GKvIGKALVLDEIINYIQSLQ 151
                     8**************************.....666*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.83E-1098155No hitNo description
SuperFamilySSF474591.31E-1798168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.58100150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-18100168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-8104151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10106156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MEPPLVNDAT FSSANPSLSE IWPSQFPSSN KRPSSLLLHN HSPNSNKHVK LSPPSETHQN  60
AALRPPQPDA TSVAAAANNS PLQTPKPKQD YIHVRARRGQ ATDSHSLAER ARREKISERM  120
KILQDLVPGC GKVIGKALVL DEIINYIQSL QRQVEFLSMK LEAVNSRLSL SPSIECFPSK  180
EVATQPFDLS GIIFGSQPAR GFAQGSQAGW LHMQMAGGFE KVT*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang11g10340.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017423095.11e-164PREDICTED: transcription factor bHLH79-like
RefseqXP_017423281.11e-164PREDICTED: transcription factor bHLH79-like
SwissprotQ69WS37e-67BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A0S3R8921e-163A0A0S3R892_PHAAN; Uncharacterized protein
STRINGGLYMA17G10290.11e-117(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.17e-69BIG PETAL P