PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g04850.2
Common NameLR48_Vigan01g199600
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 102aa    MW: 12246.1 Da    PI: 12.1227
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g04850.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.63.1e-091551064
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64
                    +++NRe+ArrsR RK+  +e+L++   +   eN++L ++l+    ++ +l++e+e
  Vang11g04850.2  1 MISNRESARRSRMRKQRHLENLRNQLNKCRVENRELNNRLQFVLHHCNRLRTENE 55
                    689*********************************************9999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001701.4E-6155IPR004827Basic-leucine zipper domain
CDDcd147022.51E-11148No hitNo description
SuperFamilySSF579592.57E-9148No hitNo description
Gene3DG3DSA:1.20.5.1707.7E-8151No hitNo description
SMARTSM003380.0018156IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MISNRESARR SRMRKQRHLE NLRNQLNKCR VENRELNNRL QFVLHHCNRL RTENEWLRSQ  60
RTLLLQKVAN LTQILIFQQF QQPISPAWTC NTSLIPINQV N*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang11g04850.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-171AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014508393.12e-66basic leucine zipper 4
RefseqXP_017432833.12e-66PREDICTED: bZIP transcription factor 2-like
TrEMBLA0A0L9TPH85e-65A0A0L9TPH8_PHAAN; Uncharacterized protein
TrEMBLA0A0S3R4W85e-65A0A0S3R4W8_PHAAN; Uncharacterized protein
TrEMBLA0A1S3UQN75e-65A0A1S3UQN7_VIGRR; basic leucine zipper 4
STRINGXP_007155805.11e-60(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.11e-17basic leucine-zipper 5
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]