PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang1010s00010.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family HB-other
Protein Properties Length: 594aa    MW: 67488.2 Da    PI: 7.0039
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang1010s00010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-1887142257
                       T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
          Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                       +kR   t++ql +Le+++ +++yp++e++ eLA+kl+Lte+q++ WF+ rR k+k+
  Vang1010s00010.1  87 KKRKLKTQSQLSALETFYDEHKYPTEEMKVELAEKLRLTEKQISGWFCHRRLKDKR 142
                       89****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.8E-2069142IPR009057Homeodomain-like
PROSITE profilePS5007117.10383143IPR001356Homeobox domain
SMARTSM003898.8E-1985147IPR001356Homeobox domain
SuperFamilySSF466893.34E-1785150IPR009057Homeodomain-like
CDDcd000863.80E-1687142No hitNo description
PfamPF000464.7E-1687142IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    Send to blast
MKDYSNFHAF EIDCWHRELG SFALGNWPVL RNELAVSNLY HVTNDIMVEL LFSFQHNTCT  60
KLPEFCWCSE SSKLQSEENK VSNEKNKKRK LKTQSQLSAL ETFYDEHKYP TEEMKVELAE  120
KLRLTEKQIS GWFCHRRLKD KRLMKDEAVA NGRQDRSSGV IQDRGSGLGQ DSCGSSKHAD  180
YRYLDAKEVE SHDFYNNEIS VADMTHRRMN HYPENVSVVD DTSSESSSFL QERAFAQGQD  240
PYDMEPSRHL TPNGALPPLN PKGAVNLGYK PSGYLKVKGE IEHAAITAVK KQLGRHYEED  300
GPLLGIEFDL LPPGAFECQT EDPANEPFCV ANPPLLNSPE ISAAKKHNLS SRYDSHYTKF  360
NSQDLHMERA DFGSLHESDF QDKQDKKARQ NIKQRQPYYG YTNHVSGRNP FPDLYEDSTG  420
EASGYNSAKN HRMSTKHGVE GMRSDSASNH SDHFEEKLAV KTKDLVLHGY DKINPKRIQK  480
SGHVKSKPSS SIRNSRVPID TEERGLSARM AKEEMFKVDK KAKNTYRDVD GAGRLSNEIL  540
VAKRAKVDML QQYHVKPSPV AEMEKRKIHR SAAEMPSSFS EDETAETSSS LDY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang1010s00010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017428991.10.0PREDICTED: uncharacterized protein LOC108337065 isoform X1
TrEMBLA0A0L9UV770.0A0A0L9UV77_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RJT50.0A0A0S3RJT5_PHAAN; Uncharacterized protein
STRINGGLYMA14G03850.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57923051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.13e-74HB-other family protein