PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0869s00010.2
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 370aa    MW: 41693.5 Da    PI: 6.3254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0869s00010.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-13165216155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Vang0869s00010.2 165 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 216
                       79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.64E-13163220No hitNo description
PROSITE profilePS5088815.751164215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-17164231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-13165230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.8E-11165216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10170221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
LGVNCLDQVL VDEETLRLEE EEQLLISSLE DKMPFLQMLQ SVESPQFFPL KEPNFQTLLR  60
LQHITKPWEG MAYVPRMEAQ VQAALELESC VTHDMLEMQS PVKSESNELQ HPLSFSCVEK  120
VSYECNQEPH KVSQSCPKSQ PATTRERRKR KRTRPSKNTE DVENQRMTHI AVERNRRRQM  180
NDHLSVLRSL MPPSYIQRGD QASIIGGAID FVKELEQLLQ SLEAQKRMRK NEEGGGSSSS  240
VLCKLPPTPS SSSPHGYGMR SSASEEVSCG DEMKAENKSE AADIKVTLIQ THVNLKIECQ  300
RKPGQLIKVI VALEDLRLTI LHLNITSSET SVLYSLNLKI EEGCSLLSAS DIAEAVHHIF  360
NFINGARHH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146151RRKRKR
2165176RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0869s00010.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017440713.10.0PREDICTED: transcription factor bHLH57 isoform X1
TrEMBLA0A0S3SZ520.0A0A0S3SZ52_PHAAN; Uncharacterized protein
STRINGXP_007135328.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.13e-69bHLH family protein