PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g08640.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 360aa    MW: 40630.8 Da    PI: 8.5956
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g08640.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.34.1e-10227248223
                     --SS-EEEEEEE--TT-SS-EE CS
            WRKY   2 dDgynWrKYGqKevkgsefprs 23 
                      D ++WrKYGqK++kgs++pr 
  Vang06g08640.1 227 ADLWAWRKYGQKPIKGSPYPRT 248
                     699******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-9212248IPR003657WRKY domain
PROSITE profilePS5081113.85221270IPR003657WRKY domain
SuperFamilySSF1182901.31E-7223249IPR003657WRKY domain
SMARTSM007742.5E-4226268IPR003657WRKY domain
PfamPF031063.3E-5228248IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
VSAPPTPLAS SSPLSLSIHP KVSAIFSALF SSKTLFALHT YMDEDWDLFA IVRSCQSATN  60
TSTAAIPETT TNTTSSSLFT SFLKEDRYDA FSFPNTVQPI PNEFHQLHQF FSPFNPTTTN  120
ATTLSAPRIN PNSPYFAQQE SQQISDHLPT LPHFLPEPST PSFNRFPDHQ QQQQNQLQLL  180
QKQEFHTPQN NSPTVSPNAQ PQTPKSRKRK SQQKKMVCQV TADKLSADLW AWRKYGQKPI  240
KGSPYPRTWK PTWTMTVTSD DPITACLSNK FCIEVTSSRT LARRTKPVCR HSWIFGVVLF  300
LENLPPKMSH VGNLRPSICH RGQGNDKEEE VKEETMEALW DNIEHNIRPT KHDILDLGT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210SRKRKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g08640.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017414089.11e-147PREDICTED: probable WRKY transcription factor 27
TrEMBLA0A0L9TZI01e-146A0A0L9TZI0_PHAAN; Uncharacterized protein
STRINGXP_007143479.11e-100(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67943249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-12WRKY DNA-binding protein 27