PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g05550.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 307aa    MW: 34971.9 Da    PI: 7.1643
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g05550.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.7e-08122174155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +r +h e E++RR+++       r+llP       ++K s ++   +  +YIk+L+
  Vang06g05550.1 122 KRWMHRETEKQRRQEMTRLCTDFRSLLPLqY---IKGKRSISDHMHEGANYIKHLE 174
                     5779*************************66...********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.49E-8119178No hitNo description
SuperFamilySSF474592.09E-11120191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.877121173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-5122174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-7122189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MSVLGSSLRS SLAFELVKGY ILVKRESITN PNYQTFECPN QITMNPLHPT DELYFQITTD  60
NYYFQPIQTT PPENQIFYDP VLDGSAPIPC TAQMGTTKGK QRGKLPAWTK EDYKTTTMDE  120
NKRWMHRETE KQRRQEMTRL CTDFRSLLPL QYIKGKRSIS DHMHEGANYI KHLENNVKEL  180
QAKRDECKKL SNLSPVVVSD SGSFSTTDLP ICVIVHPFPG GIQIKCSYSF RKYVFPLSRV  240
IDMVLKEGLD VVNCTSTKTD DSFIHTIRIE VPHTMTGTNY TELQKKLVEA ISSSCSEEIL  300
SESENC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g05550.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017414352.10.0PREDICTED: transcription factor bHLH36-like
TrEMBLA0A0S3SMT40.0A0A0S3SMT4_PHAAN; Uncharacterized protein
STRINGXP_007143342.11e-145(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.14e-31bHLH family protein