PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0626s00070.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 173aa    MW: 19635.6 Da    PI: 5.5064
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0626s00070.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.16.2e-182570349
               NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                      pGfrFhPtde+lv++yL++k+++k++++ + i+++diyk++PwdLp+
  Vang0626s00070.1 25 PGFRFHPTDEDLVSFYLQRKLHKKPISI-DLINQIDIYKYDPWDLPT 70
                      9***************************.99**************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100511.6223172IPR003441NAC domain
SuperFamilySSF1019417.19E-172472IPR003441NAC domain
PfamPF023651.1E-72572IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MGVNENFNNN HDHHGCVDDD EIPLPGFRFH PTDEDLVSFY LQRKLHKKPI SIDLINQIDI  60
YKYDPWDLPT LFYASISLQR IPNRLVAVKK VLGMPCFDMM DDLNDEGGFS HAPDNLTYGV  120
DMKQIRWCGI LKRIALAYLV VALVEIFSRS AQDRSTHPAL NIEVVLLALV SP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0626s00070.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-112AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
GenBankAP0150361e-112AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0S3RMZ26e-90A0A0S3RMZ2_PHAAN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114331739
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-22NAC domain containing protein 42