PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang04g03040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 129aa MW: 15248.4 Da PI: 11.5299 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.8 | 4.7e-08 | 47 | 106 | 5 | 64 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 ++ r+++N +Arrs RK+ +e L++ + + eN++Lk+ + l ++ +l++e++ Vang04g03040.1 47 QKRTRMISNMDSARRSHMRKQRHLEILQNQMNLFRVENRKLKNGFQFLVHHCNRLRTENK 106 56789**************************************************99985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.9E-8 | 36 | 103 | No hit | No description |
SMART | SM00338 | 1.9E-7 | 43 | 107 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.63E-8 | 48 | 99 | No hit | No description |
CDD | cd14702 | 5.47E-10 | 48 | 99 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence Send to blast |
ARFFPFNPTS PNLVTSSSAS DDPKTTPTDH NPPSNHSDWV VSLMEEQKRT RMISNMDSAR 60 RSHMRKQRHL EILQNQMNLF RVENRKLKNG FQFLVHHCNR LRTENKWLRS KQTMLRQKLA 120 DINQIFLF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang04g03040.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014520495.1 | 1e-67 | bZIP transcription factor 53-like | ||||
TrEMBL | A0A1S3VQC9 | 3e-66 | A0A1S3VQC9_VIGRR; bZIP transcription factor 53-like | ||||
STRING | XP_007156692.1 | 3e-56 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 5e-18 | basic leucine-zipper 5 |