PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g02770.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 415aa    MW: 46392.9 Da    PI: 4.1432
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g02770.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-14303353555
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                     ++ rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L ++l++ ++ 
  Vang04g02770.1 303 RKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSES 353
                     578******************************************998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.9E-13299363IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726301364IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.9E-12303375No hitNo description
PfamPF001702.1E-12303353IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.34E-13303353No hitNo description
CDDcd147021.86E-21304355No hitNo description
PROSITE patternPS000360306321IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MSWGTLIDVA GKRIDYVYLG PNKWSYFEIL AILKEMKYRN VKELWYSLGG RVLEDRLELL  60
CDDIGAMHIV SIALLNGKAH LFVVHMVSKP DYINMLQYDV GEQGEDGEDG EGQGKLREEV  120
EEERGEVGEG EGGEDGEVED NGEGVDGEVK DVGDDGHETE EDLFGEVGED GEGADDVGEV  180
GEVEEDGEGA DDGEVGDVGD DGHETKHGLV GEIYCYIEAM QASEITGLNY LLPSDPCPYP  240
GHYSMTQNTI PTFQLHKLSN QFYGFQNPQQ MVAEFSPPQS SCISSTSTSD EADEQQQSLI  300
NERKHRRMIS NRESARRSRM RKQKHLDELW SQVVWLRNEN HQLMDKLNHV SESHDRVSQE  360
NVQLREEASE LRQMICDMQL HSPYHPPSLC PIDDDVSPYV KSDSSITSSS NLLG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1315322RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g02770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.16e-46basic leucine-zipper 42