PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0323s00120.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 335aa    MW: 37083 Da    PI: 6.1806
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0323s00120.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.3e-092776154
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      r++ +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL  +++ +k+L
  Vang0323s00120.1 27 RKTQKADREKLRRDRLNEQFVELGNVLDPD----RPKNDKATILSDTIQLLKDL 76
                      6788999*******************9997....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-142596IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.0712676IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-132699IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.90E-72780No hitNo description
PfamPF000102.1E-72776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-73282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
LKIRISDTEK TNTNWLEVEP MDCSAARKTQ KADREKLRRD RLNEQFVELG NVLDPDRPKN  60
DKATILSDTI QLLKDLTSQV GKLKEEYATL NEESRELTQE KNDLREEKAS LKSDIDNLNN  120
QYQQQLRTIF PWTAMDHSVV MAPPSYPFPM PVAVPPGSIP MQPFPYFTNQ HPAVISNPHS  180
TFVPYLAPNT IVEQQSTQYV SPPLHPGCRS NVSEKPESKS KSSRESKAEK NEDSNDVTTD  240
LQLKTPGSSA DQLQIQSGRH CNSNAADSNL SSDSGFVCVH VLQDLSSGQR KSGKLSRRES  300
SCCSEGNTLG RCSSSHSAQD SSSSSAVASR KDNE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0323s00120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150390.0AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017435010.10.0PREDICTED: transcription factor bHLH121-like
RefseqXP_017435011.10.0PREDICTED: transcription factor bHLH121-like
SwissprotQ9LT232e-92BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0L9VBV30.0A0A0L9VBV3_PHAAN; Uncharacterized protein
STRINGXP_007133432.11e-177(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-86bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]