PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang02g09040.3
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 97aa    MW: 11472.1 Da    PI: 10.8666
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang02g09040.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.82e-121859546
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                    ++ +r+ +NRe+ArrsR RK++ ++ L + v++L +eN++  
  Vang02g09040.3 18 RKRKRMTSNRESARRSRMRKQKHLDDLVTQVAQLRKENQQIL 59
                    57899*********************************9754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-91473IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.9791658IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.8E-111759No hitNo description
SuperFamilySSF579592.81E-111861No hitNo description
PfamPF001701.2E-101859IPR004827Basic-leucine zipper domain
CDDcd147022.84E-141961No hitNo description
PROSITE patternPS0003602136IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
LLQNSGSEXD XQXVMXQRKR KRMTSNRESA RRSRMRKQKH LDDLVTQVAQ LRKENQQILT  60
TERDHRLESL NEIIELWLCV RRRGEDEVGI PTVPFL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11738RKRKRMTSNRESARRSRMRKQK
23037RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang02g09040.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-155AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017406399.13e-53PREDICTED: bZIP transcription factor 11-like
SwissprotC0Z2L52e-20BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A0L9T8758e-52A0A0L9T875_PHAAN; Uncharacterized protein
STRINGGLYMA12G04440.12e-31(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.19e-23basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]