PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g18710.3
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB
Protein Properties Length: 288aa    MW: 31417.8 Da    PI: 10.3157
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g18710.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.46.9e-181257147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEde l ++v+ lG+++W+ I++ ++ gR++k+c++rw + 
   Vang01g18710.3 12 KGPWSPEEDEALQRLVQALGPRNWTMISKSIP-GRSGKSCRLRWCNQ 57
                     79******************************.***********985 PP
2Myb_DNA-binding52.11.5e-1666108347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEd+ +v+a+ ++G++ W+tIar ++  Rt++ +k++w++ 
   Vang01g18710.3  66 AFTPEEDDVIVRAHSRFGNK-WATIARLLN-SRTDNAVKNHWNST 108
                      79******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129425.587762IPR017930Myb domain
SuperFamilySSF466897.11E-319105IPR009057Homeodomain-like
SMARTSM007171.6E-151160IPR001005SANT/Myb domain
PfamPF002495.7E-171257IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.8E-241365IPR009057Homeodomain-like
CDDcd001679.01E-151456No hitNo description
SMARTSM007171.1E-1363111IPR001005SANT/Myb domain
PROSITE profilePS5129419.91464113IPR017930Myb domain
CDDcd001677.11E-1166109No hitNo description
Gene3DG3DSA:1.10.10.608.9E-2266112IPR009057Homeodomain-like
PfamPF002498.2E-1466108IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MATGSRDMDR IKGPWSPEED EALQRLVQAL GPRNWTMISK SIPGRSGKSC RLRWCNQLSP  60
EVEHRAFTPE EDDVIVRAHS RFGNKWATIA RLLNSRTDNA VKNHWNSTLK RKCSALGLDA  120
TDRSPLKRSA SVSAGYLNPS SPSGSDLSDP GKPALSTPSA SAFCRPNLME AASSLSDPAT  180
SLSLCLPGLN SESIQRSLCL PGLSSEPVQR PASPAQPSPP PPPSAVSTVE ERRKQLFNPE  240
FLRVMQEMIR KEVRSYMSGM EVKNGLRIQT EVIGKAVVKR MGISNIK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A2e-40111133105MYB PROTO-ONCOGENE PROTEIN
1mse_C2e-40111133105C-Myb DNA-Binding Domain
1msf_C2e-40111133105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g18710.3
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017429109.11e-174PREDICTED: transcription factor MYB44-like
SwissprotO231602e-84MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A0S3RPT20.0A0A0S3RPT2_PHAAN; Uncharacterized protein
STRINGXP_007160886.11e-157(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-79myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]