PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang01g16570.2

Common Name

LR48_Vigan07g280000

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 129aa MW: 15314.5 Da PI: 10.4185

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang01g16570.2	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.2	4.2e-14	2	62	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 el+r +rkq+NR +ArrsR RK++ + L+e ++L++eN+ ++l+ ++++ kl + + Vang01g16570.2 2 ELRRKKRKQSNRDSARRSRMRKQKHFDDLTEQLQSLQKENDLILNQLNLTTQHYLKLHALN 62 799*************************************999999999999999987665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.9E-14	1	64	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.542	2	65	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.2E-10	2	60	No hit	No description
Pfam	PF00170	6.7E-11	2	59	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.5E-12	3	59	No hit	No description
CDD	cd14702	3.86E-19	5	55	No hit	No description
PROSITE pattern	PS00036	0	7	22	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 129 aa Download sequence Send to blast
MELRRKKRKQ SNRDSARRSR MRKQKHFDDL TEQLQSLQKE NDLILNQLNL TTQHYLKLHA 60 LNSILVAQKT ELAQTLHSFN HIIKLINDTN HYYHHHNDNK TNNNFIIPMH TPFLNHPIVA 120 TADNMCLW*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	24	RRKKRKQSNRDSARRSRMRKQK
2	16	23	RRSRMRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang01g16570.2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015036	0.0	AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017429721.1	5e-90	PREDICTED: bZIP transcription factor 44-like
TrEMBL	A0A0L9V2C6	1e-88	A0A0L9V2C6_PHAAN; Uncharacterized protein
STRING	XP_007160724.1	2e-49	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	1e-29	basic leucine-zipper 44

Publications ? help Back to Top
Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024]