PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang01g12310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | bZIP | ||||||||
Protein Properties | Length: 347aa MW: 37915.1 Da PI: 5.0948 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44 | 4.9e-14 | 182 | 235 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 kr rrk +NRe+ArrsR+RK+a ++ Le v+ L +eN+ L k+l +++ Vang01g12310.1 182 TKRLRRKDSNRESARRSRRRKQAHLADLEWQVERLRQENSHLFKQLRDASQQFR 235 69****************************************977776666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-11 | 177 | 235 | No hit | No description |
SMART | SM00338 | 1.9E-15 | 179 | 243 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.358 | 181 | 244 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.3E-11 | 182 | 230 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.09E-10 | 183 | 233 | No hit | No description |
CDD | cd14702 | 7.44E-9 | 184 | 235 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 186 | 201 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence Send to blast |
LELPHAWKFL YIGIKQLLLS PFLSLYSFVS FSFSGEMEAK LGGAAGVMAA TFDDFKWISF 60 MFDHDINDDV KPCKLDPFTG ASGHLNDAFE NLDAVTAFSS CGGITDGTVF YSENLTPVQS 120 AISATIDSQS SICVGSPVSG NKPNGRDNEV KGATTTSGSS REPSDEDDEA GLCEQSTNTV 180 DTKRLRRKDS NRESARRSRR RKQAHLADLE WQVERLRQEN SHLFKQLRDA SQQFRNADTD 240 NRVLNSDVEA LRAKVKLAED MVRRGTVPPF NNQILPNLSE LSNMNNVRGM AHVSPTITVH 300 GNDGASYGAG ITLSGHNSPL ELGNLDIPCT DFNTDNAVSS ITTMWP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 185 | 201 | RRKDSNRESARRSRRRK |
2 | 195 | 202 | RRSRRRKQ |
3 | 197 | 202 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang01g12310.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015036 | 1e-155 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017429087.1 | 0.0 | PREDICTED: basic leucine zipper 9-like isoform X1 | ||||
Swissprot | Q9FUD3 | 8e-53 | BZIP9_ARATH; Basic leucine zipper 9 | ||||
TrEMBL | A0A0S3RN21 | 0.0 | A0A0S3RN21_PHAAN; Uncharacterized protein | ||||
STRING | GLYMA17G24602.1 | 1e-145 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4195 | 34 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 2e-45 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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