PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vang01g11630.2 | ||||||||
Common Name | LR48_Vigan07g217000 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 21486.7 Da PI: 3.8888 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.2 | 2.4e-14 | 2 | 44 | 10 | 55 |
AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g Vang01g11630.2 2 RSWGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 44 57**********9...336************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 18.545 | 1 | 52 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.5E-26 | 1 | 58 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.00E-13 | 1 | 54 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.9E-25 | 1 | 54 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.17E-16 | 2 | 53 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 4.5E-8 | 2 | 44 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0034605 | Biological Process | cellular response to heat | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MRSWGSWVSE IRAPNQKTRI WLGSYSTAEA AARAYDAALL CLKGSSANLN FPSSSSSHYI 60 PQDTVMSPKS IQRVAAAAAN NFLDTAIATT PSSPPLASTT SSSSLVSSPS ISSSPSDQID 120 DDVSLLSPFG AYTPPPPSVN CDQANESMAM MEYWYDLEEL QSPKYVEQML SGAFFDIDST 180 QLFDDLYEES DISLWSFC* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00156 | DAP | Transfer from AT1G21910 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vang01g11630.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017429896.1 | 1e-143 | PREDICTED: ethylene-responsive transcription factor ERF014 | ||||
TrEMBL | A0A0L9V0K8 | 1e-141 | A0A0L9V0K8_PHAAN; Uncharacterized protein | ||||
TrEMBL | A0A0S3RN93 | 1e-141 | A0A0S3RN93_PHAAN; Uncharacterized protein | ||||
STRING | XP_007141071.1 | 7e-98 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 4e-28 | ERF family protein |
Publications ? help Back to Top | |||
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