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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Vang01g11570.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
GRAS |
| Protein Properties |
Length: 456aa MW: 49628.9 Da PI: 5.7784 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang01g11570.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 341 | 2e-104 | 81 | 452 | 1 | 374 |
GRAS 1 lvelLlecAeavss..gdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
lv+lL+++Aea++ ++++la+ +L rl+el ++ +g++++Rlaa+f AL++ l + + ++++++ + n +++l+a++l++++sP++k
Vang01g11570.1 81 LVHLLMAAAEALTPgtESHHLARVILVRLNELvSTTHGTNIERLAAHFSSALQNLLDG--AGSAHSITTDTP---NPTDTLTAFHLLQDMSPYVK 170
68**********97336777************666788*******************9..444444444444...58999*************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlv 182
f+h+taNqaIleav++e+rvHi+Dfd+++G+QW++L+q+L+sR+ gpp +lRiT++++ ++ s +++etg+rL+ fA+++g pf+f+
Vang01g11570.1 171 FAHFTANQAILEAVAHEKRVHIVDFDVTEGAQWASLMQSLSSRSTGPPapHLRITALSRGSAPgrrSIATIQETGRRLTAFAASVGQPFSFHQCR 265
********************************************765555********97766888999************************99 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklp 276
+ e++++++L++ +gEal+ n++l+l +l + ++Lk k+l+P+vv vve+e+ + +++ F+ f+++l++ysa+fdsle+++p
Vang01g11570.1 266 LDPGETFRPSSLKLIRGEALVFNCMLHLPHLS---FRASGSVASFLKGAKELNPRVVMVVEEEVARgGDAGFVGLFMDSLQHYSAVFDSLEVGFP 357
99**************************9986...333333456*******************99999*************************** PP
GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsv 370
++ +++ vEr++lg++i n v+ ++ e ++W+e+l++aGF+ vp+s + +qa+lll ++ dgyrvee ++ lvlgWk+r+L+s+
Vang01g11570.1 358 MQKWAQALVERVFLGPRIANSVSLMYRS---GGEDRGSWEEWLGAAGFRGVPVSFANHCQANLLLGLFN-DGYRVEEMgNNKLVLGWKSRRLISA 448
*************************999...778889********************************.******88699999*********** PP
GRAS 371 SaWr 374
S+W+
Vang01g11570.1 449 SVWT 452
***6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 456 aa
Download sequence Send
to blast |
MDDPDFLDLS KPSITTSSSS EEDWINLWSP LVDWGSLAAG EDNFQTLIDS IAHEDDVVST 60
PDQTIAQDSD LSSHDEKGLR LVHLLMAAAE ALTPGTESHH LARVILVRLN ELVSTTHGTN 120
IERLAAHFSS ALQNLLDGAG SAHSITTDTP NPTDTLTAFH LLQDMSPYVK FAHFTANQAI 180
LEAVAHEKRV HIVDFDVTEG AQWASLMQSL SSRSTGPPAP HLRITALSRG SAPGRRSIAT 240
IQETGRRLTA FAASVGQPFS FHQCRLDPGE TFRPSSLKLI RGEALVFNCM LHLPHLSFRA 300
SGSVASFLKG AKELNPRVVM VVEEEVARGG DAGFVGLFMD SLQHYSAVFD SLEVGFPMQK 360
WAQALVERVF LGPRIANSVS LMYRSGGEDR GSWEEWLGAA GFRGVPVSFA NHCQANLLLG 420
LFNDGYRVEE MGNNKLVLGW KSRRLISASV WTSNS*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
