PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0090s00160.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Nin-like
Protein Properties Length: 297aa    MW: 34062.5 Da    PI: 5.6927
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0090s00160.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK79.24.3e-25176223552
            RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       +++e+++k+F+ pi++AAk+++v+lT+LKr+CR+++I+RWPhRk+ksl
  Vang0090s00160.1 176 LEFEEIKKHFDVPINEAAKQMNVGLTMLKRRCRELNIMRWPHRKLKSL 223
                       89********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.392158243IPR003035RWP-RK domain
PfamPF020422.7E-23176223IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MEFASEHDFP NFETIPHTFS SCFFSAQLYP TDNTILFFFL FACLDEWYFN GVCDFRTMEV  60
SLSPLEGFSG HDWTQQLPYS SKQLCLNEFP DLENLDLDFS LPPLGEDLEE VEQKPLNIIV  120
VPEEGHCGRE KGFGDALLAI ENGSAICVKK EEVQNMEQMA VPSASSGSKK KKPCALEFEE  180
IKKHFDVPIN EAAKQMNVGL TMLKRRCREL NIMRWPHRKL KSLQLLIENV KVMYPDMLVM  240
SYELGLADEV PMLEKHKRLL EKLPGLELCA KAKKLRQACF KANYKRRRFM GMTLQA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0090s00160.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017421355.11e-176PREDICTED: protein RKD4
TrEMBLA0A0S3RED51e-175A0A0S3RED5_PHAAN; Uncharacterized protein
STRINGXP_007136514.11e-156(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68983247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.15e-37RWP-RK domain-containing protein