PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0010ss00970.2
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 358aa    MW: 39303.4 Da    PI: 5.2857
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0010ss00970.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.8e-13289334655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++Er RR +i +++ +L++l+P+     +k  + a++L +A+eYIk+Lq
  Vang0010ss00970.2 289 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAIEYIKDLQ 334
                        689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.275283333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.67E-17286347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.71E-12287338No hitNo description
Gene3DG3DSA:4.10.280.102.0E-16288348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9289334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-14289339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0042335Biological Processcuticle development
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MESDLQQHPP MFLDHQQPTN SGLTRYRSAP SSYFSSIIDR EFYEHVFNRP SSPETERMLT  60
RFVNSLGGGD ADADAADAED ALPTQNPSTV VAVKEEIETG RRSASNLIRH GSSPAGLFSN  120
INIESGYAAV RGMGTMGAAN NSTEEANFSP VTRMKNAPNY SSGLMSSRAE IGNKNNTQNN  180
AENEGFADSQ GNEFIPGFPV GSWDDSAIMS DNMTGLKRHR EEDVKPFSGL NLPESQNEAG  240
GQPSTALAHQ LSLPNTSAEM AAIEKFLQLS DSVPCKIRAK RGCATHPRSI AERVRRTKIS  300
ERMRKLQDLV PNMDKQTNTA DMLDLAIEYI KDLQKQVETL SENRDKCTCS HNQQQQQ*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00195DAPTransfer from AT1G51140Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0010ss00970.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311180.0KT031118.1 Glycine max clone HN_CCL_179 bHLH transcription factor (Glyma11g13960.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017433679.10.0PREDICTED: transcription factor bHLH130-like
RefseqXP_017433681.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A0S3SD770.0A0A0S3SD77_PHAAN; Uncharacterized protein
STRINGGLYMA12G05930.30.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.12e-79bHLH family protein